RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 SP8Q8IXZ3 490 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 MPNDQ8N594 471 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 ABCC4O15439 1325 aa13.03□□□□□ -0.32
UBE2D3-227ENST00000508818 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 GRAPQ13588 217 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 VPS33BQ9H267 617 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
UBE2D3-227ENST00000508818 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
UBE2D3-227ENST00000508818 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
UBE2D3-227ENST00000508818 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-227ENST00000508818 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
UBE2D3-227ENST00000508818 C8orf58Q8NAV2 365 aa13.01□□□□□ -0.33
UBE2D3-227ENST00000508818 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
UBE2D3-227ENST00000508818 AOC3Q16853 763 aa13□□□□□ -0.33
UBE2D3-227ENST00000508818 CCDC184Q52MB2 194 aa13□□□□□ -0.33
UBE2D3-227ENST00000508818 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
UBE2D3-227ENST00000508818 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 MYD88Q99836 296 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 STK31Q9BXU1 1019 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 SCN4AP35499 1836 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
UBE2D3-227ENST00000508818 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-227ENST00000508818 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
UBE2D3-227ENST00000508818 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
UBE2D3-227ENST00000508818 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-227ENST00000508818 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-227ENST00000508818 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 TNIP1Q15025 636 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-227ENST00000508818 TMEM88BA6NKF7 163 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 EPS15P42566 896 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 CXCL9Q07325 125 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 POTEHQ6S545 545 aa12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 METTL22Q9BUU2 404 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-227ENST00000508818 G3V3G9 751 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 WASHC4Q2M389 1173 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 TSPYL6Q8N831 410 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 EYA3Q99504 573 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 MAP3K2Q9Y2U5 619 aa12.95□□□□□ -0.34
UBE2D3-227ENST00000508818 IL16Q14005 1332 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 PDE8AO60658 829 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 RAD17O75943 681 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 SCNN1DP51172 638 aa12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-227ENST00000508818 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 GPSM2P81274 684 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 ADARB2Q9NS39 739 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 GPRC5DQ9NZD1 345 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 LAMB2P55268 1798 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 COL4A5P29400 1685 aa12.93□□□□□ -0.34
UBE2D3-227ENST00000508818 H7C1D1 291 aa12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-227ENST00000508818 HSPA1AP0DMV8 641 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-227ENST00000508818 HSPA1BP0DMV9 641 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-227ENST00000508818 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
UBE2D3-227ENST00000508818 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms