RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CRTC2Q53ET0 693 aaPredicted RBP6.88□□□□□ -1.31
SMARCA5-202ENST00000508573 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
SMARCA5-202ENST00000508573 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 SASH3O75995 380 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 IGFBP4P22692 258 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 INPP5BP32019 993 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 ELMSAN1Q6PJG2 1045 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 WFDC12Q8WWY7 111 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 IFT43Q96FT9 208 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 ZFATQ9P243 1243 aa6.87□□□□□ -1.31
SMARCA5-202ENST00000508573 HYAL3O43820 417 aaPredicted RBP6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 IREB2P48200 963 aaKnown RBP6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 PLAURQ03405 335 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 PTK7Q13308 1070 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 DGKZQ13574 1117 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 PERM1Q5SV97 790 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 KANK4Q5T7N3 995 aaPredicted RBP6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 HFE2Q6ZVN8 426 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 DHX32Q7L7V1 743 aaKnown RBP6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 LPIN3Q9BQK8 851 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 VRTNQ9H8Y1 702 aa6.86□□□□□ -1.31
SMARCA5-202ENST00000508573 ARID3CA6NKF2 412 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 MICAL2O94851 1124 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 RARAP10276 462 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 GRIK5Q16478 980 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 WFDC8Q8IUA0 241 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 VTI1AQ96AJ9 217 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 CALR3Q96L12 384 aaKnown RBP6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 PPP1R12CQ9BZL4 782 aa6.85□□□□□ -1.31
SMARCA5-202ENST00000508573 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 ARSDP51689 593 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 LRP8Q14114 963 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 C11orf91Q3C1V1 193 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 FNBP4Q8N3X1 1017 aaPredicted RBP6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 USP20Q9Y2K6 914 aa6.84□□□□□ -1.31
SMARCA5-202ENST00000508573 NOS3P29474 1203 aa6.83□□□□□ -1.32
SMARCA5-202ENST00000508573 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
SMARCA5-202ENST00000508573 PROSER2Q86WR7 435 aaPredicted RBP6.83□□□□□ -1.32
SMARCA5-202ENST00000508573 SMG9Q9H0W8 520 aaKnown RBP6.83□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L15C9J2P7 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L10C9JJH3 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L13C9JLJ4 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L12C9JPN9 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L11C9JVI0 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L21D6R901 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L18D6R9N7 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L22D6RA61 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L17D6RBQ6 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L19D6RCP7 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L20D6RJB6 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 OPLAHO14841 1288 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 USP17L24Q0WX57 530 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 CMTR1Q8N1G2 835 aaKnown RBP6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 TTC9Q92623 222 aa6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
SMARCA5-202ENST00000508573 J3QW42 95 aa6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 ARID4AP29374 1257 aaPredicted RBP6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 GPLD1P80108 840 aa6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 C11orf16Q9NQ32 467 aa6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 RTCBQ9Y3I0 505 aaKnown RBP6.81□□□□□ -1.32
SMARCA5-202ENST00000508573 FAM196BA6NMK8 535 aa6.8□□□□□ -1.32
SMARCA5-202ENST00000508573 EIF2AK2P19525 551 aaKnown RBP6.8□□□□□ -1.32
SMARCA5-202ENST00000508573 WEE1P30291 646 aa6.8□□□□□ -1.32
SMARCA5-202ENST00000508573 MEGF10Q96KG7 1140 aa6.8□□□□□ -1.32
SMARCA5-202ENST00000508573 TLR7Q9NYK1 1049 aaKnown RBP6.8□□□□□ -1.32
SMARCA5-202ENST00000508573 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 FOXO3O43524 673 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 XYLBO75191 536 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 DEAF1O75398 565 aaPredicted RBP6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 ALX3O95076 343 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 SIK1P57059 783 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 CDCA8Q53HL2 280 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 GDF6Q6KF10 455 aaPredicted RBP6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 RGL4Q8IZJ4 473 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 RGS22Q8NE09 1264 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 FAM200AQ8TCP9 573 aa6.79□□□□□ -1.32
SMARCA5-202ENST00000508573 PSAPP07602 524 aa6.78□□□□□ -1.32
SMARCA5-202ENST00000508573 NRLP54845 237 aa6.78□□□□□ -1.32
SMARCA5-202ENST00000508573 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
SMARCA5-202ENST00000508573 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
SMARCA5-202ENST00000508573 LRFN2Q9ULH4 789 aa6.78□□□□□ -1.32
SMARCA5-202ENST00000508573 DLL1O00548 723 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 GHRHP01286 108 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 RFX1P22670 979 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 PRR23CQ6ZRP0 262 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 TREML1Q86YW5 311 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 MYO19Q96H55 970 aa6.77□□□□□ -1.33
SMARCA5-202ENST00000508573 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms