RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ZMYM4Q5VZL5 1548 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 PPFIA1Q13136 1202 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 KIAA0753Q2KHM9 967 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 CARD6Q9BX69 1037 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 TSGA10Q9BZW7 698 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 ZHX3Q9H4I2 956 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 DCTPP1Q9H773 170 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 RNF216Q9NWF9 866 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 CCDC96Q2M329 555 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 NAPGQ99747 312 aaPredicted RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 TRIM7Q9C029 511 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 PIK3C2GO75747 1445 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 ANKRD18BA2A2Z9 1011 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 BUB1BO60566 1050 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 TRIM21P19474 475 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC77Q9BR77 488 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 RAB34Q9BZG1 259 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 BOLA2Q9H3K6 86 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 LUC7L2Q9Y383 392 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 WDHD1O75717 1129 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 MYL5Q02045 173 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CNNM1Q9NRU3 951 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 STIM2Q9P246 746 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 ARHGAP6O43182 974 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 PRPHP41219 470 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CCT2P78371 535 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 HOOK3Q86VS8 718 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 SLC12A7Q9Y666 1083 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 POLR3AO14802 1390 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 EFCAB8A8MWE9 144 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 AKR1B15C9JRZ8 316 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 KIF3CO14782 793 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 NEBLO76041 1014 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 GBP1P32455 592 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 FAM160A1Q05DH4 1040 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 TRIM14Q14142 442 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 C17orf53Q8N3J3 647 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 PRAM1Q96QH2 718 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 VCXQ9H320 206 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 CBX8Q9HC52 389 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 RAD54L2Q9Y4B4 1467 aa8.33□□□□□ -1.08
UBE2D3-224ENST00000508474 GOLGA8AA7E2F4 631 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 SLC8A1P32418 973 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 DNA2P51530 1060 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 NLRP6P59044 892 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 TNNC1P63316 161 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 KARSQ15046 597 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 LARP1Q6PKG0 1096 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 NECAB1Q8N987 351 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 LRRC27Q9C0I9 530 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 ZNF213O14771 459 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 SPTLC2O15270 562 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 DESP17661 470 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 AK2P54819 239 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 EFCAB13Q8IY85 973 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 RPGRIP1Q96KN7 1286 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 LZTFL1Q9NQ48 299 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 PLEKHM2Q8IWE5 1019 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 CACNA2D3Q8IZS8 1091 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 DISP3Q9P2K9 1392 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 GNAT3A8MTJ3 354 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 SSBP05455 408 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 NOP2P46087 812 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 BRAPQ7Z569 592 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 FEZ2Q9UHY8 353 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 ABCC5O15440 1437 aa8.32□□□□□ -1.08
UBE2D3-224ENST00000508474 A0A1W2PRG0 241 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 PPFIA3O75145 1194 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 PPFIA4O75335 1185 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 PSME1Q06323 249 aa8.31□□□□□ -1.08
UBE2D3-224ENST00000508474 BRF1Q92994 677 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms