RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
RNF4-210ENST00000508235 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
RNF4-210ENST00000508235 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
RNF4-210ENST00000508235 ABCC4O15439 1325 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 FER1L6Q2WGJ9 1857 aa18.94■□□□□ 0.62
RNF4-210ENST00000508235 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
RNF4-210ENST00000508235 CASP7P55210 303 aa18.94■□□□□ 0.62
RNF4-210ENST00000508235 CTSWP56202 376 aa18.94■□□□□ 0.62
RNF4-210ENST00000508235 RTKN2Q8IZC4 609 aa18.94■□□□□ 0.62
RNF4-210ENST00000508235 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
RNF4-210ENST00000508235 ATF7IPQ6VMQ6 1270 aa18.93■□□□□ 0.62
RNF4-210ENST00000508235 C7orf43Q8WVR3 580 aa18.93■□□□□ 0.62
RNF4-210ENST00000508235 ZNF219Q9P2Y4 722 aaPredicted RBP18.93■□□□□ 0.62
RNF4-210ENST00000508235 UTYO14607 1347 aa18.92■□□□□ 0.62
RNF4-210ENST00000508235 SBF1O95248 1867 aa18.92■□□□□ 0.62
RNF4-210ENST00000508235 TAF1P21675 1872 aa18.92■□□□□ 0.62
RNF4-210ENST00000508235 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 TAOK3Q9H2K8 898 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
RNF4-210ENST00000508235 TRIM27P14373 513 aa18.9■□□□□ 0.62
RNF4-210ENST00000508235 YY1P25490 414 aa18.9■□□□□ 0.62
RNF4-210ENST00000508235 SP8Q8IXZ3 490 aa18.9■□□□□ 0.62
RNF4-210ENST00000508235 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
RNF4-210ENST00000508235 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
RNF4-210ENST00000508235 CCDC88AQ3V6T2 1871 aa18.9■□□□□ 0.62
RNF4-210ENST00000508235 LMNB1P20700 586 aa18.89■□□□□ 0.61
RNF4-210ENST00000508235 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
RNF4-210ENST00000508235 INTS3Q68E01 1043 aaKnown RBP18.89■□□□□ 0.61
RNF4-210ENST00000508235 CSF1RP07333 972 aa18.88■□□□□ 0.61
RNF4-210ENST00000508235 NBPF7P0C2Y1 421 aaPredicted RBP18.88■□□□□ 0.61
RNF4-210ENST00000508235 FKBP4Q02790 459 aaKnown RBP eCLIP18.88■□□□□ 0.61
RNF4-210ENST00000508235 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
RNF4-210ENST00000508235 CELF1Q92879 486 aaKnown RBP18.88■□□□□ 0.61
RNF4-210ENST00000508235 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
RNF4-210ENST00000508235 USP44Q9H0E7 712 aa18.88■□□□□ 0.61
RNF4-210ENST00000508235 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 NFKBIEO00221 500 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 FOXO4P98177 505 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 RASSF7Q02833 373 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
RNF4-210ENST00000508235 PSMD1Q99460 953 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 GREM2Q9H772 168 aa18.87■□□□□ 0.61
RNF4-210ENST00000508235 DICER1Q9UPY3 1922 aaKnown RBP18.87■□□□□ 0.61
RNF4-210ENST00000508235 MS4A1P11836 297 aa18.86■□□□□ 0.61
RNF4-210ENST00000508235 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
RNF4-210ENST00000508235 SEC31BQ9NQW1 1179 aa18.86■□□□□ 0.61
RNF4-210ENST00000508235 RNF181Q9P0P0 153 aa18.86■□□□□ 0.61
RNF4-210ENST00000508235 ANKRD18BA2A2Z9 1011 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
RNF4-210ENST00000508235 ITGA6P23229 1130 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
RNF4-210ENST00000508235 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
RNF4-210ENST00000508235 C9orf131Q5VYM1 1079 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 LMBR1LQ6UX01 489 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 OLFM4Q6UX06 510 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 MPNDQ8N594 471 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 CLUAP1Q96AJ1 413 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 SUCLG2Q96I99 432 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 CHMP3Q9Y3E7 222 aa18.85■□□□□ 0.61
RNF4-210ENST00000508235 SNED1Q8TER0 1413 aa18.84■□□□□ 0.61
RNF4-210ENST00000508235 SPEF2Q9C093 1822 aa18.84■□□□□ 0.61
RNF4-210ENST00000508235 ZC3H4Q9UPT8 1303 aaKnown RBP18.84■□□□□ 0.61
RNF4-210ENST00000508235 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
RNF4-210ENST00000508235 FAM161AQ3B820 660 aa18.84■□□□□ 0.61
RNF4-210ENST00000508235 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
RNF4-210ENST00000508235 DZIP1LQ8IYY4 767 aaKnown RBP18.84■□□□□ 0.61
RNF4-210ENST00000508235 GNAI3P08754 354 aa18.83■□□□□ 0.6
RNF4-210ENST00000508235 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.6
RNF4-210ENST00000508235 VPS33BQ9H267 617 aa18.83■□□□□ 0.6
RNF4-210ENST00000508235 BSDC1Q9NW68 430 aaPredicted RBP18.83■□□□□ 0.6
RNF4-210ENST00000508235 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
RNF4-210ENST00000508235 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
RNF4-210ENST00000508235 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
RNF4-210ENST00000508235 RTFDC1Q9BY42 306 aaPredicted RBP18.82■□□□□ 0.6
RNF4-210ENST00000508235 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
RNF4-210ENST00000508235 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
RNF4-210ENST00000508235 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
RNF4-210ENST00000508235 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
RNF4-210ENST00000508235 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
RNF4-210ENST00000508235 KAZALD1Q96I82 304 aa18.81■□□□□ 0.6
RNF4-210ENST00000508235 ZNF277Q9NRM2 450 aaPredicted RBP18.81■□□□□ 0.6
RNF4-210ENST00000508235 NSFL1CQ9UNZ2 370 aaKnown RBP18.81■□□□□ 0.6
RNF4-210ENST00000508235 COL4A1P02462 1669 aa18.81■□□□□ 0.6
RNF4-210ENST00000508235 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
RNF4-210ENST00000508235 TNNQ9UQP3 1299 aa18.8■□□□□ 0.6
RNF4-210ENST00000508235 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
RNF4-210ENST00000508235 PRELPP51888 382 aa18.79■□□□□ 0.6
RNF4-210ENST00000508235 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
RNF4-210ENST00000508235 MEIS3Q99687 375 aa18.79■□□□□ 0.6
RNF4-210ENST00000508235 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
RNF4-210ENST00000508235 LTBP1Q14766 1721 aa18.78■□□□□ 0.6
RNF4-210ENST00000508235 GPSM2P81274 684 aa18.78■□□□□ 0.6
RNF4-210ENST00000508235 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
RNF4-210ENST00000508235 JDP2Q8WYK2 163 aa18.78■□□□□ 0.6
RNF4-210ENST00000508235 EYA3Q99504 573 aa18.78■□□□□ 0.6
RNF4-210ENST00000508235 XDHP47989 1333 aa18.77■□□□□ 0.6
RNF4-210ENST00000508235 PPIP5K2O43314 1243 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms