RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 CASP7P55210 303 aa35.56■■■■□ 3.28
MSX2-202ENST00000507785 SLC51AQ86UW1 340 aa35.56■■■■□ 3.28
MSX2-202ENST00000507785 TAOK3Q9H2K8 898 aa35.56■■■■□ 3.28
MSX2-202ENST00000507785 GRAPQ13588 217 aa35.55■■■■□ 3.28
MSX2-202ENST00000507785 CC2D2BQ6DHV5 1058 aa35.55■■■■□ 3.28
MSX2-202ENST00000507785 GRAPLQ8TC17 118 aaPredicted RBP35.55■■■■□ 3.28
MSX2-202ENST00000507785 BBOX1O75936 387 aa35.54■■■■□ 3.28
MSX2-202ENST00000507785 RARSP54136 660 aaKnown RBP35.54■■■■□ 3.28
MSX2-202ENST00000507785 BRPF1P55201 1214 aaPredicted RBP35.54■■■■□ 3.28
MSX2-202ENST00000507785 RTKN2Q8IZC4 609 aa35.54■■■■□ 3.28
MSX2-202ENST00000507785 UBE3BQ7Z3V4 1068 aa35.53■■■■□ 3.28
MSX2-202ENST00000507785 FKBP4Q02790 459 aaKnown RBP eCLIP35.52■■■■□ 3.28
MSX2-202ENST00000507785 ATP6V0A2Q9Y487 856 aa35.52■■■■□ 3.28
MSX2-202ENST00000507785 TIAM2Q8IVF5 1701 aa35.52■■■■□ 3.28
MSX2-202ENST00000507785 SLC4A10Q6U841 1118 aa35.51■■■■□ 3.28
MSX2-202ENST00000507785 LRRC37AA6NMS7 1700 aa35.51■■■■□ 3.27
MSX2-202ENST00000507785 ALDH1L1O75891 902 aa35.49■■■■□ 3.27
MSX2-202ENST00000507785 CTSWP56202 376 aa35.49■■■■□ 3.27
MSX2-202ENST00000507785 CELF1Q92879 486 aaKnown RBP35.49■■■■□ 3.27
MSX2-202ENST00000507785 PLA2G12BQ9BX93 195 aa35.49■■■■□ 3.27
MSX2-202ENST00000507785 CCDC152Q4G0S7 254 aa35.48■■■■□ 3.27
MSX2-202ENST00000507785 GRIPAP1Q4V328 841 aa35.48■■■■□ 3.27
MSX2-202ENST00000507785 SRCIN1Q9C0H9 1055 aa35.48■■■■□ 3.27
MSX2-202ENST00000507785 ZC3H4Q9UPT8 1303 aaKnown RBP35.48■■■■□ 3.27
MSX2-202ENST00000507785 SP8Q8IXZ3 490 aa35.47■■■■□ 3.27
MSX2-202ENST00000507785 PSMD1Q99460 953 aa35.47■■■■□ 3.27
MSX2-202ENST00000507785 TMC4Q7Z404 712 aa35.46■■■■□ 3.27
MSX2-202ENST00000507785 TTLL11Q8NHH1 800 aa35.46■■■■□ 3.27
MSX2-202ENST00000507785 SEC31BQ9NQW1 1179 aa35.46■■■■□ 3.27
MSX2-202ENST00000507785 NOB1Q9ULX3 412 aaKnown RBP35.45■■■■□ 3.27
MSX2-202ENST00000507785 GRM8O00222 908 aa35.44■■■■□ 3.26
MSX2-202ENST00000507785 CCDC85AQ96PX6 553 aaPredicted RBP35.44■■■■□ 3.26
MSX2-202ENST00000507785 ZNF277Q9NRM2 450 aaPredicted RBP35.44■■■■□ 3.26
MSX2-202ENST00000507785 RTL9Q8NET4 1388 aa35.43■■■■□ 3.26
MSX2-202ENST00000507785 RPS8P62241 208 aaKnown RBP35.42■■■■□ 3.26
MSX2-202ENST00000507785 ZNF526Q8TF50 670 aaPredicted RBP35.41■■■■□ 3.26
MSX2-202ENST00000507785 TMX4Q9H1E5 349 aaPredicted RBP35.41■■■■□ 3.26
MSX2-202ENST00000507785 CSF1RP07333 972 aa35.4■■■■□ 3.26
MSX2-202ENST00000507785 GREM2Q9H772 168 aa35.4■■■■□ 3.26
MSX2-202ENST00000507785 IARSP41252 1262 aaKnown RBP35.39■■■■□ 3.26
MSX2-202ENST00000507785 C9orf78Q9NZ63 289 aaPredicted RBP35.39■■■■□ 3.26
MSX2-202ENST00000507785 UTYO14607 1347 aa35.38■■■■□ 3.25
MSX2-202ENST00000507785 KIF16BQ96L93 1317 aa35.38■■■■□ 3.25
MSX2-202ENST00000507785 LTBP1Q14766 1721 aa35.38■■■■□ 3.25
MSX2-202ENST00000507785 RTFDC1Q9BY42 306 aaPredicted RBP35.38■■■■□ 3.25
MSX2-202ENST00000507785 GPBP1L1Q9HC44 474 aaPredicted RBP35.38■■■■□ 3.25
MSX2-202ENST00000507785 DUOX1Q9NRD9 1551 aa35.38■■■■□ 3.25
MSX2-202ENST00000507785 FOXO4P98177 505 aa35.37■■■■□ 3.25
MSX2-202ENST00000507785 API5Q9BZZ5 524 aaKnown RBP35.37■■■■□ 3.25
MSX2-202ENST00000507785 SPEF2Q9C093 1822 aa35.36■■■■□ 3.25
MSX2-202ENST00000507785 BCAR3O75815 825 aa35.36■■■■□ 3.25
MSX2-202ENST00000507785 MPNDQ8N594 471 aa35.36■■■■□ 3.25
MSX2-202ENST00000507785 ARHGAP45Q92619 1136 aa35.36■■■■□ 3.25
MSX2-202ENST00000507785 COL4A5P29400 1685 aa35.36■■■■□ 3.25
MSX2-202ENST00000507785 DPP8Q6V1X1 898 aaPredicted RBP35.35■■■■□ 3.25
MSX2-202ENST00000507785 NBPF7P0C2Y1 421 aaPredicted RBP35.34■■■■□ 3.25
MSX2-202ENST00000507785 EPHA10Q5JZY3 1008 aa35.34■■■■□ 3.25
MSX2-202ENST00000507785 ANKRD18AQ8IVF6 992 aa35.34■■■■□ 3.25
MSX2-202ENST00000507785 CDC5LQ99459 802 aaKnown RBP35.34■■■■□ 3.25
MSX2-202ENST00000507785 FAM161AQ3B820 660 aa35.33■■■■□ 3.25
MSX2-202ENST00000507785 KAZALD1Q96I82 304 aa35.32■■■■□ 3.24
MSX2-202ENST00000507785 GLTPD2A6NH11 291 aa35.31■■■■□ 3.24
MSX2-202ENST00000507785 SUPT20HQ8NEM7 779 aa35.31■■■■□ 3.24
MSX2-202ENST00000507785 SUCLG2Q96I99 432 aa35.31■■■■□ 3.24
MSX2-202ENST00000507785 KDM2BQ8NHM5 1336 aa35.31■■■■□ 3.24
MSX2-202ENST00000507785 ITGA6P23229 1130 aa35.3■■■■□ 3.24
MSX2-202ENST00000507785 CCT4P50991 539 aaKnown RBP35.3■■■■□ 3.24
MSX2-202ENST00000507785 GPSM2P81274 684 aa35.3■■■■□ 3.24
MSX2-202ENST00000507785 USP44Q9H0E7 712 aa35.3■■■■□ 3.24
MSX2-202ENST00000507785 VPS33BQ9H267 617 aa35.3■■■■□ 3.24
MSX2-202ENST00000507785 NSFL1CQ9UNZ2 370 aaKnown RBP35.29■■■■□ 3.24
MSX2-202ENST00000507785 LMBR1LQ6UX01 489 aa35.28■■■■□ 3.24
MSX2-202ENST00000507785 NMRK2Q9NPI5 230 aa35.28■■■■□ 3.24
MSX2-202ENST00000507785 FZD9O00144 591 aa35.27■■■■□ 3.24
MSX2-202ENST00000507785 IPO8O15397 1037 aaKnown RBP35.27■■■■□ 3.24
MSX2-202ENST00000507785 LARGE2Q8N3Y3 721 aa35.27■■■■□ 3.24
MSX2-202ENST00000507785 BSDC1Q9NW68 430 aaPredicted RBP35.27■■■■□ 3.24
MSX2-202ENST00000507785 PODXL2Q9NZ53 605 aa35.27■■■■□ 3.24
MSX2-202ENST00000507785 PPIP5K2O43314 1243 aa35.26■■■■□ 3.24
MSX2-202ENST00000507785 AOC3Q16853 763 aa35.26■■■■□ 3.24
MSX2-202ENST00000507785 KIF3CO14782 793 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 TRIM27P14373 513 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 KIAA2012Q0VF49 1180 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 ATF7IPQ6VMQ6 1270 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 POLLQ9UGP5 575 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 WDR90Q96KV7 1748 aa35.25■■■■□ 3.23
MSX2-202ENST00000507785 INTS3Q68E01 1043 aaKnown RBP35.24■■■■□ 3.23
MSX2-202ENST00000507785 DPY19L2Q6NUT2 758 aa35.24■■■■□ 3.23
MSX2-202ENST00000507785 JDP2Q8WYK2 163 aa35.24■■■■□ 3.23
MSX2-202ENST00000507785 FRAT1Q92837 279 aaPredicted RBP35.24■■■■□ 3.23
MSX2-202ENST00000507785 TNNQ9UQP3 1299 aa35.24■■■■□ 3.23
MSX2-202ENST00000507785 ZNF541Q9H0D2 1346 aa35.24■■■■□ 3.23
MSX2-202ENST00000507785 ANKRD18BA2A2Z9 1011 aa35.23■■■■□ 3.23
MSX2-202ENST00000507785 TBC1D16Q8TBP0 767 aa35.23■■■■□ 3.23
MSX2-202ENST00000507785 IGHMBP2P38935 993 aaKnown RBP35.22■■■■□ 3.23
MSX2-202ENST00000507785 IFIT5Q13325 482 aaKnown RBP35.22■■■■□ 3.23
MSX2-202ENST00000507785 RABL6Q3YEC7 729 aaPredicted RBP35.22■■■■□ 3.23
MSX2-202ENST00000507785 MINPP1Q9UNW1 487 aa35.22■■■■□ 3.23
MSX2-202ENST00000507785 BICC1Q9H694 974 aaKnown RBP35.21■■■■□ 3.23
MSX2-202ENST00000507785 CHMP3Q9Y3E7 222 aa35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms