RNA–Protein interactions for RNA: ENST00000507184.5

IFT172-216, Transcript of intraflagellar transport 172, humanhuman

TSL 5

Gene IFT172, Length 5,565 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-216ENST00000507184 SUDS3Q9H7L9 328 aaPredicted RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 IFIT1P09914 478 aaKnown RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 ERCC3P19447 782 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 FLIIQ13045 1269 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 UBLCP1Q8WVY7 318 aaPredicted RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 TATP17735 454 aaPredicted RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
IFT172-216ENST00000507184 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
IFT172-216ENST00000507184 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 GJC1P36383 396 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 SPAG5Q96R06 1193 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.391e-5■■■■□ 19.8
IFT172-216ENST00000507184 NDC80O14777 642 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 HPDP32754 393 aaPredicted RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 NEDD9Q14511 834 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 CCDC25Q86WR0 208 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 PPP2R3AQ06190 1150 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 CCDC110Q8TBZ0 833 aa12.64□□□□□ -0.39
IFT172-216ENST00000507184 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
IFT172-216ENST00000507184 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 MAP2K2P36507 400 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 VAV2P52735 878 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 EVCP57679 992 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 KRT83P78385 493 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
IFT172-216ENST00000507184 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 TTC36A6NLP5 189 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 KRT86O43790 486 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 UBA7P41226 1012 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
IFT172-216ENST00000507184 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
IFT172-216ENST00000507184 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 KIF5AQ12840 1032 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 HS1BP3Q53T59 392 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
IFT172-216ENST00000507184 TUBB4BP68371 445 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 CUL5Q93034 780 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
IFT172-216ENST00000507184 TOP2BQ02880 1626 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
IFT172-216ENST00000507184 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
IFT172-216ENST00000507184 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 PRPHP41219 470 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 ARID5AQ03989 594 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 NECAB1Q8N987 351 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
IFT172-216ENST00000507184 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
IFT172-216ENST00000507184 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
IFT172-216ENST00000507184 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 TYRO3Q06418 890 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
IFT172-216ENST00000507184 ATF3P18847 181 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 GCKP35557 465 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
IFT172-216ENST00000507184 SYNCQ9H7C4 482 aa12.61□□□□□ -0.39
IFT172-216ENST00000507184 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
IFT172-216ENST00000507184 METAP2P50579 478 aaKnown RBP eCLIP12.6□□□□□ -0.39
IFT172-216ENST00000507184 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
IFT172-216ENST00000507184 VCXQ9H320 206 aa12.6□□□□□ -0.39
IFT172-216ENST00000507184 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
IFT172-216ENST00000507184 KIF21BO75037 1637 aa12.6□□□□□ -0.39
IFT172-216ENST00000507184 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
IFT172-216ENST00000507184 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms