RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ZNF784Q8NCA9 323 aaPredicted RBP24.53■■□□□ 1.52
LMNA-221ENST00000506981 GRAPQ13588 217 aa24.52■■□□□ 1.52
LMNA-221ENST00000506981 UBE3BQ7Z3V4 1068 aa24.52■■□□□ 1.52
LMNA-221ENST00000506981 GRAPLQ8TC17 118 aaPredicted RBP24.52■■□□□ 1.52
LMNA-221ENST00000506981 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
LMNA-221ENST00000506981 BBOX1O75936 387 aa24.51■■□□□ 1.51
LMNA-221ENST00000506981 CCDC152Q4G0S7 254 aa24.51■■□□□ 1.51
LMNA-221ENST00000506981 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
LMNA-221ENST00000506981 BEND3Q5T5X7 828 aa24.51■■□□□ 1.51
LMNA-221ENST00000506981 FKBP4Q02790 459 aaKnown RBP eCLIP24.5■■□□□ 1.51
LMNA-221ENST00000506981 TMC4Q7Z404 712 aa24.5■■□□□ 1.51
LMNA-221ENST00000506981 SRCIN1Q9C0H9 1055 aa24.5■■□□□ 1.51
LMNA-221ENST00000506981 H7C1W4 665 aa24.49■■□□□ 1.51
LMNA-221ENST00000506981 ALDH1L1O75891 902 aa24.49■■□□□ 1.51
LMNA-221ENST00000506981 OLFM4Q6UX06 510 aa24.49■■□□□ 1.51
LMNA-221ENST00000506981 CTSWP56202 376 aa24.48■■□□□ 1.51
LMNA-221ENST00000506981 ZC3H4Q9UPT8 1303 aaKnown RBP24.48■■□□□ 1.51
LMNA-221ENST00000506981 ATP6V0A2Q9Y487 856 aa24.48■■□□□ 1.51
LMNA-221ENST00000506981 KIF16BQ96L93 1317 aa24.47■■□□□ 1.51
LMNA-221ENST00000506981 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
LMNA-221ENST00000506981 C9orf78Q9NZ63 289 aaPredicted RBP24.47■■□□□ 1.51
LMNA-221ENST00000506981 SP8Q8IXZ3 490 aa24.46■■□□□ 1.51
LMNA-221ENST00000506981 ZNF526Q8TF50 670 aaPredicted RBP24.46■■□□□ 1.51
LMNA-221ENST00000506981 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
LMNA-221ENST00000506981 GPBP1L1Q9HC44 474 aaPredicted RBP24.46■■□□□ 1.51
LMNA-221ENST00000506981 GRM8O00222 908 aa24.45■■□□□ 1.5
LMNA-221ENST00000506981 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.5
LMNA-221ENST00000506981 PSMD1Q99460 953 aa24.45■■□□□ 1.5
LMNA-221ENST00000506981 SNED1Q8TER0 1413 aa24.44■■□□□ 1.5
LMNA-221ENST00000506981 PRELPP51888 382 aa24.44■■□□□ 1.5
LMNA-221ENST00000506981 CELF1Q92879 486 aaKnown RBP24.44■■□□□ 1.5
LMNA-221ENST00000506981 PLA2G12BQ9BX93 195 aa24.44■■□□□ 1.5
LMNA-221ENST00000506981 API5Q9BZZ5 524 aaKnown RBP24.44■■□□□ 1.5
LMNA-221ENST00000506981 RPS8P62241 208 aaKnown RBP24.43■■□□□ 1.5
LMNA-221ENST00000506981 CDC5LQ99459 802 aaKnown RBP24.43■■□□□ 1.5
LMNA-221ENST00000506981 ZNF277Q9NRM2 450 aaPredicted RBP24.43■■□□□ 1.5
LMNA-221ENST00000506981 NOB1Q9ULX3 412 aaKnown RBP24.43■■□□□ 1.5
LMNA-221ENST00000506981 COL4A1P02462 1669 aa24.43■■□□□ 1.5
LMNA-221ENST00000506981 KDM2BQ8NHM5 1336 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 CASP7P55210 303 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 DPP8Q6V1X1 898 aaPredicted RBP24.42■■□□□ 1.5
LMNA-221ENST00000506981 MPNDQ8N594 471 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 SUPT20HQ8NEM7 779 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 TTLL11Q8NHH1 800 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 SEC31BQ9NQW1 1179 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
LMNA-221ENST00000506981 IARSP41252 1262 aaKnown RBP24.41■■□□□ 1.5
LMNA-221ENST00000506981 ANKRD18AQ8IVF6 992 aa24.41■■□□□ 1.5
LMNA-221ENST00000506981 IPO8O15397 1037 aaKnown RBP24.39■■□□□ 1.49
LMNA-221ENST00000506981 SLC51AQ86UW1 340 aa24.39■■□□□ 1.49
LMNA-221ENST00000506981 GREM2Q9H772 168 aa24.39■■□□□ 1.49
LMNA-221ENST00000506981 LTBP1Q14766 1721 aa24.38■■□□□ 1.49
LMNA-221ENST00000506981 CCT4P50991 539 aaKnown RBP24.38■■□□□ 1.49
LMNA-221ENST00000506981 DPY19L2Q6NUT2 758 aa24.38■■□□□ 1.49
LMNA-221ENST00000506981 JDP2Q8WYK2 163 aa24.38■■□□□ 1.49
LMNA-221ENST00000506981 ARHGAP45Q92619 1136 aa24.38■■□□□ 1.49
LMNA-221ENST00000506981 CHMP3Q9Y3E7 222 aa24.38■■□□□ 1.49
LMNA-221ENST00000506981 LARGE2Q8N3Y3 721 aa24.37■■□□□ 1.49
LMNA-221ENST00000506981 PPIP5K2O43314 1243 aa24.36■■□□□ 1.49
LMNA-221ENST00000506981 IGHMBP2P38935 993 aaKnown RBP24.36■■□□□ 1.49
LMNA-221ENST00000506981 FAM161AQ3B820 660 aa24.36■■□□□ 1.49
LMNA-221ENST00000506981 FRAT1Q92837 279 aaPredicted RBP24.36■■□□□ 1.49
LMNA-221ENST00000506981 VPS33BQ9H267 617 aa24.36■■□□□ 1.49
LMNA-221ENST00000506981 NSFL1CQ9UNZ2 370 aaKnown RBP24.36■■□□□ 1.49
LMNA-221ENST00000506981 DUOX1Q9NRD9 1551 aa24.36■■□□□ 1.49
LMNA-221ENST00000506981 GLTPD2A6NH11 291 aa24.35■■□□□ 1.49
LMNA-221ENST00000506981 BCAR3O75815 825 aa24.35■■□□□ 1.49
LMNA-221ENST00000506981 CSF1RP07333 972 aa24.35■■□□□ 1.49
LMNA-221ENST00000506981 ITGA6P23229 1130 aa24.35■■□□□ 1.49
LMNA-221ENST00000506981 RTFDC1Q9BY42 306 aaPredicted RBP24.35■■□□□ 1.49
LMNA-221ENST00000506981 UTYO14607 1347 aa24.35■■□□□ 1.49
LMNA-221ENST00000506981 A0A1B0GUL6 1792 aa24.34■■□□□ 1.49
LMNA-221ENST00000506981 ANKRD18BA2A2Z9 1011 aa24.34■■□□□ 1.49
LMNA-221ENST00000506981 FOXO4P98177 505 aa24.34■■□□□ 1.49
LMNA-221ENST00000506981 WDR90Q96KV7 1748 aa24.34■■□□□ 1.49
LMNA-221ENST00000506981 NBPF7P0C2Y1 421 aaPredicted RBP24.33■■□□□ 1.49
LMNA-221ENST00000506981 GPSM2P81274 684 aa24.33■■□□□ 1.49
LMNA-221ENST00000506981 IFIT5Q13325 482 aaKnown RBP24.33■■□□□ 1.49
LMNA-221ENST00000506981 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
LMNA-221ENST00000506981 MPHOSPH8Q99549 860 aa24.33■■□□□ 1.49
LMNA-221ENST00000506981 ANKIB1Q9P2G1 1089 aa24.33■■□□□ 1.49
LMNA-221ENST00000506981 C6orf229H3BNL8 230 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 AOC3Q16853 763 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 LMBR1LQ6UX01 489 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 SUCLG2Q96I99 432 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 EYA3Q99504 573 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 BSDC1Q9NW68 430 aaPredicted RBP24.32■■□□□ 1.48
LMNA-221ENST00000506981 SCN4AP35499 1836 aa24.32■■□□□ 1.48
LMNA-221ENST00000506981 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
LMNA-221ENST00000506981 CCDC57Q2TAC2 916 aa24.31■■□□□ 1.48
LMNA-221ENST00000506981 TAF7LQ5H9L4 462 aa24.31■■□□□ 1.48
LMNA-221ENST00000506981 ZKSCAN2Q63HK3 967 aa24.31■■□□□ 1.48
LMNA-221ENST00000506981 ATF7IPQ6VMQ6 1270 aa24.31■■□□□ 1.48
LMNA-221ENST00000506981 COL4A5P29400 1685 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 EPHA10Q5JZY3 1008 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 USP44Q9H0E7 712 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 NMRK2Q9NPI5 230 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 GGA1Q9UJY5 639 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 XDHP47989 1333 aa24.3■■□□□ 1.48
LMNA-221ENST00000506981 UFL1O94874 794 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms