RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 AOC3Q16853 763 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 SUPT20HQ8NEM7 779 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 TRPM7Q96QT4 1865 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 DUOX1Q9NRD9 1551 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 COL4A1P02462 1669 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 NIM1KQ8IY84 436 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 MPNDQ8N594 471 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 DPP8Q6V1X1 898 aaPredicted RBP28.74■■■□□ 2.19
SUDS3P1-201ENST00000505831 TMC4Q7Z404 712 aa28.74■■■□□ 2.19
SUDS3P1-201ENST00000505831 EPS15P42566 896 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 ZNRF3Q9ULT6 936 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 CLEC11AQ9Y240 323 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 KIAA2012Q0VF49 1180 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CCDC27Q2M243 656 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 RIC3Q7Z5B4 369 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CNTROBQ8N137 903 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CXCL9Q07325 125 aa28.71■■■□□ 2.19
SUDS3P1-201ENST00000505831 MAP1SQ66K74 1059 aaPredicted RBP28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 TSPYL6Q8N831 410 aa28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 CELF1Q92879 486 aaKnown RBP28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 MYH3P11055 1940 aa28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 TMEM88BA6NKF7 163 aa28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 LMOD1P29536 600 aaPredicted RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 GOLGA2Q08379 1002 aa28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 ZBTB38Q8NAP3 1195 aaPredicted RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 MKRN1Q9UHC7 482 aaKnown RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 POLR2AP24928 1970 aaKnown RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 CNTNAP1P78357 1384 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 IRS4O14654 1257 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 RTL5Q5HYW3 569 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 CCDC30Q5VVM6 783 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 CHMP4AQ9BY43 222 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 NCBP3Q53F19 620 aaKnown RBP28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 USP50Q70EL3 339 aaPredicted RBP28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 WWC1Q8IX03 1113 aa28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 GPRC5DQ9NZD1 345 aa28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 COL13A1Q5TAT6 717 aaPredicted RBP28.66■■■□□ 2.18
SUDS3P1-201ENST00000505831 CCDC191Q8NCU4 936 aa28.66■■■□□ 2.18
SUDS3P1-201ENST00000505831 HSPA1AP0DMV8 641 aaKnown RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 HSPA1BP0DMV9 641 aaKnown RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 MYD88Q99836 296 aa28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 METTL22Q9BUU2 404 aaPredicted RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.18
SUDS3P1-201ENST00000505831 SCN9AQ15858 1988 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 YDJCA8MPS7 323 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 PCCAP05165 728 aaPredicted RBP28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 RPS8P62241 208 aaKnown RBP28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 CIAPIN1Q6FI81 312 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 ADARB2Q9NS39 739 aaKnown RBP28.62■■■□□ 2.17
SUDS3P1-201ENST00000505831 NSFL1CQ9UNZ2 370 aaKnown RBP28.62■■■□□ 2.17
SUDS3P1-201ENST00000505831 GMPSP49915 693 aaPredicted RBP28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 POLLQ9UGP5 575 aa28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 IL16Q14005 1332 aa28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 DDX58O95786 925 aaKnown RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 HSP90B1P14625 803 aaKnown RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 GPSM2P81274 684 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 TNIP1Q15025 636 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 WASHC4Q2M389 1173 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 KSR2Q6VAB6 950 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 CWC25Q9NXE8 425 aaPredicted RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 CDHR2Q9BYE9 1310 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 PSME4Q14997 1843 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 RASSF10A6NK89 507 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 RAD17O75943 681 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 VEGFBP49765 207 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 SEC31BQ9NQW1 1179 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 PGAP2Q9UHJ9 254 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 MAP3K2Q9Y2U5 619 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 PDE8AO60658 829 aa28.58■■■□□ 2.17
SUDS3P1-201ENST00000505831 PI4KAP2A4QPH2 592 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 IGKV5-2P06315 115 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 FMR1Q06787 632 aaKnown RBP eCLIP28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 PI4KAP1Q8N8J0 262 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 JARID2Q92833 1246 aaPredicted RBP28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 PODXL2Q9NZ53 605 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 TWISTNBQ3B726 338 aaPredicted RBP28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 TBC1D16Q8TBP0 767 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 SPEF2Q9C093 1822 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 MRS2Q9HD23 443 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 HIRAP54198 1017 aaPredicted RBP28.55■■■□□ 2.16
SUDS3P1-201ENST00000505831 DEFB115Q30KQ5 88 aa28.55■■■□□ 2.16
SUDS3P1-201ENST00000505831 C6orf229H3BNL8 230 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CCDC152Q4G0S7 254 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CST9Q5W186 159 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 G2E3Q7L622 706 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 TRAF5O00463 557 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 RIMBP2O15034 1052 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 ANP32CO43423 234 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 ZC3H15Q8WU90 426 aaKnown RBP28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 DPF2Q92785 391 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 STK31Q9BXU1 1019 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 DBNDD1Q9H9R9 158 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 SLC4A2P04920 1241 aa28.52■■■□□ 2.16
SUDS3P1-201ENST00000505831 EYA3Q99504 573 aa28.52■■■□□ 2.16
SUDS3P1-201ENST00000505831 SHTN1A0MZ66 631 aa28.51■■■□□ 2.15
SUDS3P1-201ENST00000505831 PSMD14O00487 310 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms