RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 AOC3Q16853 763 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 SUPT20HQ8NEM7 779 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 TRPM7Q96QT4 1865 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 DUOX1Q9NRD9 1551 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 COL4A1P02462 1669 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 NIM1KQ8IY84 436 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 MPNDQ8N594 471 aa28.75■■■□□ 2.19
SUDS3P1-201ENST00000505831 DPP8Q6V1X1 898 aaPredicted RBP28.74■■■□□ 2.19
SUDS3P1-201ENST00000505831 TMC4Q7Z404 712 aa28.74■■■□□ 2.19
SUDS3P1-201ENST00000505831 EPS15P42566 896 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 ZNRF3Q9ULT6 936 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 CLEC11AQ9Y240 323 aa28.73■■■□□ 2.19
SUDS3P1-201ENST00000505831 KIAA2012Q0VF49 1180 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CCDC27Q2M243 656 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 RIC3Q7Z5B4 369 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CNTROBQ8N137 903 aa28.72■■■□□ 2.19
SUDS3P1-201ENST00000505831 CXCL9Q07325 125 aa28.71■■■□□ 2.19
SUDS3P1-201ENST00000505831 MAP1SQ66K74 1059 aaPredicted RBP28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 TSPYL6Q8N831 410 aa28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 CELF1Q92879 486 aaKnown RBP28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 MYH3P11055 1940 aa28.7■■■□□ 2.18
SUDS3P1-201ENST00000505831 TMEM88BA6NKF7 163 aa28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 LMOD1P29536 600 aaPredicted RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 GOLGA2Q08379 1002 aa28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 ZBTB38Q8NAP3 1195 aaPredicted RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 MKRN1Q9UHC7 482 aaKnown RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 POLR2AP24928 1970 aaKnown RBP28.69■■■□□ 2.18
SUDS3P1-201ENST00000505831 CNTNAP1P78357 1384 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 IRS4O14654 1257 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 RTL5Q5HYW3 569 aaPredicted RBP28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 CCDC30Q5VVM6 783 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 CHMP4AQ9BY43 222 aa28.68■■■□□ 2.18
SUDS3P1-201ENST00000505831 NCBP3Q53F19 620 aaKnown RBP28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 USP50Q70EL3 339 aaPredicted RBP28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 WWC1Q8IX03 1113 aa28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 GPRC5DQ9NZD1 345 aa28.67■■■□□ 2.18
SUDS3P1-201ENST00000505831 COL13A1Q5TAT6 717 aaPredicted RBP28.66■■■□□ 2.18
SUDS3P1-201ENST00000505831 CCDC191Q8NCU4 936 aa28.66■■■□□ 2.18
SUDS3P1-201ENST00000505831 HSPA1AP0DMV8 641 aaKnown RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 HSPA1BP0DMV9 641 aaKnown RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 MYD88Q99836 296 aa28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 METTL22Q9BUU2 404 aaPredicted RBP28.65■■■□□ 2.18
SUDS3P1-201ENST00000505831 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.18
SUDS3P1-201ENST00000505831 SCN9AQ15858 1988 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 YDJCA8MPS7 323 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 PCCAP05165 728 aaPredicted RBP28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 RPS8P62241 208 aaKnown RBP28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 CIAPIN1Q6FI81 312 aa28.63■■■□□ 2.17
SUDS3P1-201ENST00000505831 ADARB2Q9NS39 739 aaKnown RBP28.62■■■□□ 2.17
SUDS3P1-201ENST00000505831 NSFL1CQ9UNZ2 370 aaKnown RBP28.62■■■□□ 2.17
SUDS3P1-201ENST00000505831 GMPSP49915 693 aaPredicted RBP28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 POLLQ9UGP5 575 aa28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 IL16Q14005 1332 aa28.61■■■□□ 2.17
SUDS3P1-201ENST00000505831 DDX58O95786 925 aaKnown RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 HSP90B1P14625 803 aaKnown RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 GPSM2P81274 684 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 TNIP1Q15025 636 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 WASHC4Q2M389 1173 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 KSR2Q6VAB6 950 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 CWC25Q9NXE8 425 aaPredicted RBP28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 CDHR2Q9BYE9 1310 aa28.6■■■□□ 2.17
SUDS3P1-201ENST00000505831 PSME4Q14997 1843 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 ZNF316A6NFI3 1004 aaPredicted RBP28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 RASSF10A6NK89 507 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 RAD17O75943 681 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 VEGFBP49765 207 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 SEC31BQ9NQW1 1179 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 PGAP2Q9UHJ9 254 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 MAP3K2Q9Y2U5 619 aa28.59■■■□□ 2.17
SUDS3P1-201ENST00000505831 PDE8AO60658 829 aa28.58■■■□□ 2.17
SUDS3P1-201ENST00000505831 PI4KAP2A4QPH2 592 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 IGKV5-2P06315 115 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 FMR1Q06787 632 aaKnown RBP eCLIP28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 PI4KAP1Q8N8J0 262 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 JARID2Q92833 1246 aaPredicted RBP28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 PODXL2Q9NZ53 605 aa28.57■■■□□ 2.16
SUDS3P1-201ENST00000505831 TWISTNBQ3B726 338 aaPredicted RBP28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 TBC1D16Q8TBP0 767 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 SPEF2Q9C093 1822 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 MRS2Q9HD23 443 aa28.56■■■□□ 2.16
SUDS3P1-201ENST00000505831 HIRAP54198 1017 aaPredicted RBP28.55■■■□□ 2.16
SUDS3P1-201ENST00000505831 DEFB115Q30KQ5 88 aa28.55■■■□□ 2.16
SUDS3P1-201ENST00000505831 C6orf229H3BNL8 230 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CCDC152Q4G0S7 254 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CST9Q5W186 159 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 G2E3Q7L622 706 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
SUDS3P1-201ENST00000505831 TRAF5O00463 557 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 RIMBP2O15034 1052 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 ANP32CO43423 234 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 ZC3H15Q8WU90 426 aaKnown RBP28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 DPF2Q92785 391 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 STK31Q9BXU1 1019 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 DBNDD1Q9H9R9 158 aa28.53■■■□□ 2.16
SUDS3P1-201ENST00000505831 SLC4A2P04920 1241 aa28.52■■■□□ 2.16
SUDS3P1-201ENST00000505831 EYA3Q99504 573 aa28.52■■■□□ 2.16
SUDS3P1-201ENST00000505831 SHTN1A0MZ66 631 aa28.51■■■□□ 2.15
SUDS3P1-201ENST00000505831 PSMD14O00487 310 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms