RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 CERS3Q8IU89 383 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 A0A087WZG4 1122 aa13.46□□□□□ -0.25
PAPD4-207ENST00000504233 MAP4K1Q92918 833 aa13.46□□□□□ -0.25
PAPD4-207ENST00000504233 DBNLQ9UJU6 430 aaKnown RBP13.46□□□□□ -0.25
PAPD4-207ENST00000504233 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
PAPD4-207ENST00000504233 C5P01031 1676 aa13.46□□□□□ -0.25
PAPD4-207ENST00000504233 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.26
PAPD4-207ENST00000504233 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.26
PAPD4-207ENST00000504233 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.26
PAPD4-207ENST00000504233 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.26
PAPD4-207ENST00000504233 CABP4P57796 275 aa13.45□□□□□ -0.26
PAPD4-207ENST00000504233 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
PAPD4-207ENST00000504233 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
PAPD4-207ENST00000504233 DBNDD2Q9BQY9 259 aa13.45□□□□□ -0.26
PAPD4-207ENST00000504233 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
PAPD4-207ENST00000504233 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
PAPD4-207ENST00000504233 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
PAPD4-207ENST00000504233 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
PAPD4-207ENST00000504233 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 BLOC1S2Q6QNY1 142 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
PAPD4-207ENST00000504233 SIPA1L3O60292 1781 aaPredicted RBP13.44□□□□□ -0.26
PAPD4-207ENST00000504233 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.264e-7■■□□□ 13.3
PAPD4-207ENST00000504233 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 USP25Q9UHP3 1055 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
PAPD4-207ENST00000504233 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 TM6SF1Q9BZW5 370 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
PAPD4-207ENST00000504233 PHF14O94880 888 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 CCDC183Q5T5S1 534 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 NAP1L2Q9ULW6 460 aaPredicted RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 HIP1O00291 1037 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 UBE2HP62256 183 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
PAPD4-207ENST00000504233 ZSCAN31Q96LW9 406 aaPredicted RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
PAPD4-207ENST00000504233 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
PAPD4-207ENST00000504233 KCNB2Q92953 911 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 COL15A1P39059 1388 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 TTLL7Q6ZT98 887 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
PAPD4-207ENST00000504233 TAF5LO75529 589 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 PSMA5P28066 241 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 FOSBP53539 338 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
PAPD4-207ENST00000504233 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
PAPD4-207ENST00000504233 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
PAPD4-207ENST00000504233 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 NBPF26B4DH59 902 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 JAK2O60674 1132 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 A1BGP04217 495 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 NBPF10Q6P3W6 841 aaKnown RBP13.41□□□□□ -0.26
PAPD4-207ENST00000504233 NBPF15Q8N660 670 aa13.41□□□□□ -0.26
PAPD4-207ENST00000504233 ERICH4A6NGS2 130 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 TIMM10P62072 90 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 ZNF594Q96JF6 807 aaPredicted RBP13.4□□□□□ -0.26
PAPD4-207ENST00000504233 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 NPHP1O15259 732 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 CAMK4Q16566 473 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
PAPD4-207ENST00000504233 CCDC39Q9UFE4 941 aa13.4□□□□□ -0.26
PAPD4-207ENST00000504233 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
PAPD4-207ENST00000504233 NAA30Q147X3 362 aaPredicted RBP13.39□□□□□ -0.27
PAPD4-207ENST00000504233 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
PAPD4-207ENST00000504233 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
PAPD4-207ENST00000504233 MST1RQ04912 1400 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 GOLIM4O00461 696 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 ATP5JP18859 108 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 ZNF609O15014 1411 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
PAPD4-207ENST00000504233 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 HSPA2P54652 639 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 ADCY5O95622 1261 aa13.38□□□□□ -0.27
PAPD4-207ENST00000504233 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms