RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZNF34Q8IZ26 560 aa25.84■■□□□ 1.73
UBE2D3-216ENST00000503742 NEK4P51957 841 aa25.84■■□□□ 1.73
UBE2D3-216ENST00000503742 SYNE4Q8N205 404 aa25.84■■□□□ 1.73
UBE2D3-216ENST00000503742 ZNF609O15014 1411 aa25.83■■□□□ 1.73
UBE2D3-216ENST00000503742 IL27Q8NEV9 243 aa25.83■■□□□ 1.73
UBE2D3-216ENST00000503742 PUS3Q9BZE2 481 aaKnown RBP25.83■■□□□ 1.73
UBE2D3-216ENST00000503742 MYH3P11055 1940 aa25.83■■□□□ 1.72
UBE2D3-216ENST00000503742 COL5A3P25940 1745 aaPredicted RBP25.82■■□□□ 1.72
UBE2D3-216ENST00000503742 UBN2Q6ZU65 1347 aa25.82■■□□□ 1.72
UBE2D3-216ENST00000503742 HAUS7Q99871 368 aa25.82■■□□□ 1.72
UBE2D3-216ENST00000503742 FSD1Q9BTV5 496 aa25.82■■□□□ 1.72
UBE2D3-216ENST00000503742 MCM2P49736 904 aa25.81■■□□□ 1.72
UBE2D3-216ENST00000503742 NMIQ13287 307 aaPredicted RBP25.81■■□□□ 1.72
UBE2D3-216ENST00000503742 FAM227BQ96M60 508 aa25.81■■□□□ 1.72
UBE2D3-216ENST00000503742 TTLL11Q8NHH1 800 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 FOXD4L1Q9NU39 408 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 RFX7Q2KHR2 1363 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 THSD7AQ9UPZ6 1657 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 PTH1RQ03431 593 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 IFIT5Q13325 482 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 TRMT112Q9UI30 125 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 USP21Q9UK80 565 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 SNX14Q9Y5W7 946 aa25.8■■□□□ 1.72
UBE2D3-216ENST00000503742 IRS4O14654 1257 aaPredicted RBP25.79■■□□□ 1.72
UBE2D3-216ENST00000503742 EDC3Q96F86 508 aaKnown RBP25.79■■□□□ 1.72
UBE2D3-216ENST00000503742 CTSWP56202 376 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 TIMM10P62072 90 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 RAB3GAP1Q15042 981 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 A0A0D9SFI3 127 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 CAMTA2O94983 1202 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 KCNB2Q92953 911 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 NEUROD6Q96NK8 337 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 CEP126Q9P2H0 1117 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
UBE2D3-216ENST00000503742 CCDC171Q6TFL3 1326 aa25.77■■□□□ 1.72
UBE2D3-216ENST00000503742 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
UBE2D3-216ENST00000503742 A0A1B0GUL7 405 aa25.76■■□□□ 1.72
UBE2D3-216ENST00000503742 PDE8AO60658 829 aa25.76■■□□□ 1.72
UBE2D3-216ENST00000503742 RASEFQ8IZ41 740 aa25.76■■□□□ 1.72
UBE2D3-216ENST00000503742 CCDC85AQ96PX6 553 aaPredicted RBP25.76■■□□□ 1.72
UBE2D3-216ENST00000503742 GREM2Q9H772 168 aa25.76■■□□□ 1.71
UBE2D3-216ENST00000503742 MCM4P33991 863 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 ITGA6P23229 1130 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 NECTIN1Q15223 517 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 MAP4K1Q92918 833 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 AK7Q96M32 723 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 DNAJC2Q99543 621 aaKnown RBP25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 NDUFB9Q9Y6M9 179 aa25.75■■□□□ 1.71
UBE2D3-216ENST00000503742 TAF7LQ5H9L4 462 aa25.74■■□□□ 1.71
UBE2D3-216ENST00000503742 TMX3Q96JJ7 454 aa25.74■■□□□ 1.71
UBE2D3-216ENST00000503742 UPF3BQ9BZI7 483 aaKnown RBP25.74■■□□□ 1.71
UBE2D3-216ENST00000503742 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
UBE2D3-216ENST00000503742 RIPOR2Q9Y4F9 1068 aa25.74■■□□□ 1.71
UBE2D3-216ENST00000503742 TICAM2Q86XR7 235 aa25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 TNPO1Q92973 898 aaKnown RBP25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 CWC22Q9HCG8 908 aaKnown RBP25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 RIC1Q4ADV7 1423 aa25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 SUSD4Q5VX71 490 aa25.73■■□□□ 1.71
UBE2D3-216ENST00000503742 BCORQ6W2J9 1755 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 ANKRD18BA2A2Z9 1011 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 CUL4AQ13619 759 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 PARP10Q53GL7 1025 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 KBTBD3Q8NAB2 608 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 SPEF2Q9C093 1822 aa25.72■■□□□ 1.71
UBE2D3-216ENST00000503742 LINC00116Q8NCU8 138 aa25.71■■□□□ 1.71
UBE2D3-216ENST00000503742 TTC14Q96N46 770 aa25.71■■□□□ 1.71
UBE2D3-216ENST00000503742 RBM8AQ9Y5S9 174 aaKnown RBP25.71■■□□□ 1.71
UBE2D3-216ENST00000503742 NHSQ6T4R5 1651 aa25.71■■□□□ 1.71
UBE2D3-216ENST00000503742 PRPF40BQ6NWY9 871 aaKnown RBP25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 DDX46Q7L014 1031 aaKnown RBP25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 PTF1AQ7RTS3 328 aa25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 ZNF589Q86UQ0 364 aaPredicted RBP25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 PAG1Q9NWQ8 432 aa25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 SH3TC1Q8TE82 1336 aa25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 LRP5O75197 1615 aa25.7■■□□□ 1.7
UBE2D3-216ENST00000503742 BTAF1O14981 1849 aa25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 LDHAL6AQ6ZMR3 332 aa25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 ZGPATQ8N5A5 531 aaKnown RBP25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 UTP14AQ9BVJ6 771 aaKnown RBP25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 XAGE2Q96GT9 111 aa25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 TM6SF1Q9BZW5 370 aa25.69■■□□□ 1.7
UBE2D3-216ENST00000503742 TAF5LO75529 589 aa25.68■■□□□ 1.7
UBE2D3-216ENST00000503742 IFIT1P09914 478 aaKnown RBP25.68■■□□□ 1.7
UBE2D3-216ENST00000503742 CREB3L3Q68CJ9 461 aa25.68■■□□□ 1.7
UBE2D3-216ENST00000503742 CNTNAP4Q9C0A0 1308 aa25.68■■□□□ 1.7
UBE2D3-216ENST00000503742 DDX60Q8IY21 1712 aaKnown RBP25.68■■□□□ 1.7
UBE2D3-216ENST00000503742 ADORA1P30542 326 aa25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 GOLIM4O00461 696 aa25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 CYP2E1P05181 493 aaPredicted RBP25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 HSPA1LP34931 641 aa25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 VGLL2Q8N8G2 317 aa25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 GJD4Q96KN9 370 aaPredicted RBP25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 LAMB2P55268 1798 aa25.67■■□□□ 1.7
UBE2D3-216ENST00000503742 NTSR2O95665 410 aa25.66■■□□□ 1.7
UBE2D3-216ENST00000503742 NUCB2P80303 420 aa25.66■■□□□ 1.7
UBE2D3-216ENST00000503742 METTL24Q5JXM2 366 aa25.66■■□□□ 1.7
UBE2D3-216ENST00000503742 CLEC4GQ6UXB4 293 aa25.66■■□□□ 1.7
UBE2D3-216ENST00000503742 CLEC17AQ6ZS10 378 aa25.66■■□□□ 1.7
UBE2D3-216ENST00000503742 INTS4Q96HW7 963 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms