RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IGFLR1Q9H665 355 aa5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 RNF114Q9Y508 228 aa5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 OAS3Q9Y6K5 1087 aaKnown RBP5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 ATAD2Q6PL18 1390 aa5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 C21orf2O43822 256 aa5.26□□□□□ -1.57
HMGB1P35-201ENST00000503360 IGLV1-40P01703 118 aa5.26□□□□□ -1.57
HMGB1P35-201ENST00000503360 SSTR4P31391 388 aa5.26□□□□□ -1.57
HMGB1P35-201ENST00000503360 DHX32Q7L7V1 743 aaKnown RBP5.26□□□□□ -1.57
HMGB1P35-201ENST00000503360 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
HMGB1P35-201ENST00000503360 ZBTB42B2RXF5 422 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 HOXD8P13378 290 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 CPB1P15086 417 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 INPP5BP32019 993 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 CLDN10P78369 228 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 WWC1Q8IX03 1113 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 MUC3BQ9H195 1237 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 KIAA1024Q9UPX6 916 aa5.25□□□□□ -1.57
HMGB1P35-201ENST00000503360 DKK1O94907 266 aa5.24□□□□□ -1.57
HMGB1P35-201ENST00000503360 EGFRP00533 1210 aa5.24□□□□□ -1.57
HMGB1P35-201ENST00000503360 SPINK2P20155 84 aa5.24□□□□□ -1.57
HMGB1P35-201ENST00000503360 GRIK1P39086 918 aa5.24□□□□□ -1.57
HMGB1P35-201ENST00000503360 UVSSAQ2YD98 709 aa5.24□□□□□ -1.57
HMGB1P35-201ENST00000503360 USP17L3A6NCW0 530 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 USP17L4A6NCW7 530 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 DHX15O43143 795 aaKnown RBP5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 GRNP28799 593 aaKnown RBP5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 MCM6Q14566 821 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 USP17L2Q6R6M4 530 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 USP17L1Q7RTZ2 530 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 DTX1Q86Y01 620 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 ZFATQ9P243 1243 aa5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 RBM19Q9Y4C8 960 aaKnown RBP5.23□□□□□ -1.57
HMGB1P35-201ENST00000503360 MED26O95402 600 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 SOX18P35713 384 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 ARSDP51689 593 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 SETDB1Q15047 1291 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 ZDHHC13Q8IUH4 622 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 DEPDC4Q8N2C3 294 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 OGFOD1Q8N543 542 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 TSEN2Q8NCE0 465 aaKnown RBP5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 CEP41Q9BYV8 373 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 SMG9Q9H0W8 520 aaKnown RBP5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 TLR7Q9NYK1 1049 aaKnown RBP5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 STOML1Q9UBI4 398 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 BCS1LQ9Y276 419 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 COG6Q9Y2V7 657 aa5.22□□□□□ -1.57
HMGB1P35-201ENST00000503360 IFT43Q96FT9 208 aa5.21□□□□□ -1.58
HMGB1P35-201ENST00000503360 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
HMGB1P35-201ENST00000503360 ATP9BO43861 1147 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 TGFB1P01137 390 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 IGFBP4P22692 258 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 IDH3AP50213 366 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 PLAURQ03405 335 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 NFIAQ12857 509 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 PLD4Q96BZ4 506 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 DBNDD2Q9BQY9 259 aa5.2□□□□□ -1.58
HMGB1P35-201ENST00000503360 ALX3O95076 343 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 WNT11O96014 354 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 RARAP10276 462 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 TARSP26639 723 aaKnown RBP5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 SEC13P55735 322 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 RNF43Q68DV7 783 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 SCG3Q8WXD2 468 aaKnown RBP5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 MYO19Q96H55 970 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 RBSNQ9H1K0 784 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 MKRN1Q9UHC7 482 aaKnown RBP5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 ADGRE2Q9UHX3 823 aa5.19□□□□□ -1.58
HMGB1P35-201ENST00000503360 LOC102724428A0A0B4J2F2 783 aa5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 GLB1P16278 677 aa5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 EIF2AK2P19525 551 aaKnown RBP5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 SIK1P57059 783 aa5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 IL22RA1Q8N6P7 574 aa5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 UBL7Q96S82 380 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P35-201ENST00000503360 PRR19A6NJB7 356 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 ADAMTS4O75173 837 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 TMEM132AQ24JP5 1023 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 CLEC10AQ8IUN9 316 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 ARMC10Q8N2F6 343 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 FAM46AQ96IP4 442 aaKnown RBP5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 NGLY1Q96IV0 654 aa5.17□□□□□ -1.58
HMGB1P35-201ENST00000503360 SASH3O75995 380 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 MICAL2O94851 1124 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 PSAPP07602 524 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 JAG1P78504 1218 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 CPSF6Q16630 551 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 C11orf91Q3C1V1 193 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 MYRFLQ96LU7 910 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 UCN2Q96RP3 112 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 PPME1Q9Y570 386 aa5.16□□□□□ -1.58
HMGB1P35-201ENST00000503360 FOXO3O43524 673 aa5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 GHRHP01286 108 aa5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 MLLT1Q03111 559 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 POU5F2Q8N7G0 328 aa5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 CHMP7Q8WUX9 453 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 C7orf69Q9H7B7 122 aa5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P35-201ENST00000503360 CD68P34810 354 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 KRT25Q7Z3Z0 450 aa5.14□□□□□ -1.59
HMGB1P35-201ENST00000503360 ADAMTS19Q8TE59 1207 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms