RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
EXOSC9-203ENST00000503139 KHNYNO15037 678 aaKnown RBP13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 BNIP3LO60238 219 aa13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 SNRPBP14678 240 aaKnown RBP13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 ITGA6P23229 1130 aa13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
EXOSC9-203ENST00000503139 PHACTR2O75167 634 aa13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 GNA15P30679 374 aa13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 LDLRAD1Q5T700 205 aa13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 GSX2Q9BZM3 304 aa13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
EXOSC9-203ENST00000503139 LCE2BO14633 110 aa13.36□□□□□ -0.27
EXOSC9-203ENST00000503139 CCINQ13939 588 aa13.35□□□□□ -0.27
EXOSC9-203ENST00000503139 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
EXOSC9-203ENST00000503139 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
EXOSC9-203ENST00000503139 CCDC74AQ96AQ1 378 aa13.35□□□□□ -0.27
EXOSC9-203ENST00000503139 SORBS3O60504 671 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 SASH3O75995 380 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 TCF3P15923 654 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 PSMD2Q13200 908 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 TSNAXIP1Q2TAA8 658 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 ABHD17AQ96GS6 310 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 BACH2Q9BYV9 841 aa13.34□□□□□ -0.27
EXOSC9-203ENST00000503139 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
EXOSC9-203ENST00000503139 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
EXOSC9-203ENST00000503139 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
EXOSC9-203ENST00000503139 EREGO14944 169 aa13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 IRS1P35568 1242 aa13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 VEGFBP49765 207 aa13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 GTPBP3Q969Y2 492 aaKnown RBP13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 ZFATQ9P243 1243 aa13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 ATXN7L1Q9ULK2 861 aaPredicted RBP13.32□□□□□ -0.28
EXOSC9-203ENST00000503139 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
EXOSC9-203ENST00000503139 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
EXOSC9-203ENST00000503139 MMP20O60882 483 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 POLR3DP05423 398 aaPredicted RBP13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 CD33P20138 364 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 ITGAEP38570 1179 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 SPEM2Q0P670 501 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 TTC39BQ5VTQ0 682 aaPredicted RBP13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 KRT25Q7Z3Z0 450 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 SLC30A3Q99726 388 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 AK5Q9Y6K8 562 aa13.3□□□□□ -0.28
EXOSC9-203ENST00000503139 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 OR13H1Q8NG92 308 aa13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 NPHS2Q9NP85 383 aa13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 VTI1BQ9UEU0 232 aa13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
EXOSC9-203ENST00000503139 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
EXOSC9-203ENST00000503139 RARAP10276 462 aa13.28□□□□□ -0.28
EXOSC9-203ENST00000503139 CES1P23141 567 aa13.28□□□□□ -0.28
EXOSC9-203ENST00000503139 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
EXOSC9-203ENST00000503139 NFKB1P19838 968 aa13.27□□□□□ -0.29
EXOSC9-203ENST00000503139 Q6ZNB5 142 aa13.27□□□□□ -0.29
EXOSC9-203ENST00000503139 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
EXOSC9-203ENST00000503139 MAP3K6O95382 1288 aa13.26□□□□□ -0.29
EXOSC9-203ENST00000503139 FGFR3P22607 806 aa13.26□□□□□ -0.29
EXOSC9-203ENST00000503139 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
EXOSC9-203ENST00000503139 PHF24Q9UPV7 400 aa13.26□□□□□ -0.29
EXOSC9-203ENST00000503139 SCAMP3O14828 347 aaKnown RBP13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 CTSHP09668 335 aa13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 C12orf49Q9H741 205 aa13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 KANSL3Q9P2N6 904 aa13.25□□□□□ -0.29
EXOSC9-203ENST00000503139 GIPC1O14908 333 aa13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 HOXD8P13378 290 aaPredicted RBP13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 SOX18P35713 384 aa13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 RAB44Q7Z6P3 723 aaPredicted RBP13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 SALL4Q9UJQ4 1053 aa13.24□□□□□ -0.29
EXOSC9-203ENST00000503139 GPR25O00155 361 aa13.23□□□□□ -0.29
EXOSC9-203ENST00000503139 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
EXOSC9-203ENST00000503139 BHMTQ93088 406 aa13.23□□□□□ -0.29
EXOSC9-203ENST00000503139 CRELD1Q96HD1 420 aa13.23□□□□□ -0.29
EXOSC9-203ENST00000503139 CDC14CA4D256 554 aa13.22□□□□□ -0.29
EXOSC9-203ENST00000503139 POTECB2RU33 542 aa13.22□□□□□ -0.29
EXOSC9-203ENST00000503139 PEAR1Q5VY43 1037 aaPredicted RBP13.22□□□□□ -0.29
EXOSC9-203ENST00000503139 VWA5B2Q8N398 1253 aa13.22□□□□□ -0.29
EXOSC9-203ENST00000503139 TMEM87AQ8NBN3 555 aa13.22□□□□□ -0.29
EXOSC9-203ENST00000503139 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 KIF4AO95239 1232 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 CTBSQ01459 385 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.29
EXOSC9-203ENST00000503139 PSAPP07602 524 aa13.2□□□□□ -0.3
EXOSC9-203ENST00000503139 EDN3P14138 238 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms