RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 SYNE4Q8N205 404 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 PSMD1Q99460 953 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 HACL1Q9UJ83 578 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 CRY2Q49AN0 593 aa14.61□□□□□ -0.07
UBE2D3-211ENST00000502404 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
UBE2D3-211ENST00000502404 COL13A1Q5TAT6 717 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-211ENST00000502404 RBM17Q96I25 401 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-211ENST00000502404 TSPYL4Q9UJ04 414 aa14.61□□□□□ -0.07
UBE2D3-211ENST00000502404 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 HOXA10P31260 410 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 RALBP1Q15311 655 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 EAPPQ56P03 285 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 GIGYF2Q6Y7W6 1299 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 TTLL7Q6ZT98 887 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 NUTM1Q86Y26 1132 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 TNS4Q8IZW8 715 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 GPC2Q8N158 579 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-211ENST00000502404 FZD9O00144 591 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 GPTP24298 496 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 PDE4AP27815 886 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 EPHX2P34913 555 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 RIPK4P57078 832 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-211ENST00000502404 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
UBE2D3-211ENST00000502404 LMOD1P29536 600 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-211ENST00000502404 MFSD10Q14728 455 aa14.58□□□□□ -0.08
UBE2D3-211ENST00000502404 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.08
UBE2D3-211ENST00000502404 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 EIF2S2P20042 333 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 SUSD4Q5VX71 490 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 LARGE2Q8N3Y3 721 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 UTP14AQ9BVJ6 771 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 SCN4AP35499 1836 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
UBE2D3-211ENST00000502404 LAMB4A4D0S4 1761 aa14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 RNF123Q5XPI4 1314 aa14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
UBE2D3-211ENST00000502404 NTSR2O95665 410 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 SUPT20HQ8NEM7 779 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 AIDAQ96BJ3 306 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 ABCC12Q96J65 1359 aa14.55□□□□□ -0.08
UBE2D3-211ENST00000502404 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-211ENST00000502404 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-211ENST00000502404 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
UBE2D3-211ENST00000502404 CNTNAP1P78357 1384 aa14.54□□□□□ -0.08
UBE2D3-211ENST00000502404 KDM3BQ7LBC6 1761 aa14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 BBOX1O75936 387 aa14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 WDR70Q9NW82 654 aa14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
UBE2D3-211ENST00000502404 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
UBE2D3-211ENST00000502404 NUP98P52948 1817 aa14.52□□□□□ -0.09
UBE2D3-211ENST00000502404 PPIP5K2O43314 1243 aa14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 AIMP1Q12904 312 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 PDIA6Q15084 440 aa14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 DEFB115Q30KQ5 88 aa14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 MAP1SQ66K74 1059 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 USP50Q70EL3 339 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 DDX21Q9NR30 783 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBE2D3-211ENST00000502404 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 VEGFBP49765 207 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 TCIRG1Q13488 830 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 LRP10Q7Z4F1 713 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 TMC2Q8TDI7 906 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 XAGE3Q8WTP9 111 aa14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 TRMT112Q9UI30 125 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-211ENST00000502404 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms