RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 INTS3Q68E01 1043 aaKnown RBP19.65■□□□□ 0.74
CPNE1-228ENST00000498814 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
CPNE1-228ENST00000498814 UTRNP46939 3433 aa19.64■□□□□ 0.74
CPNE1-228ENST00000498814 CCDC152Q4G0S7 254 aa19.64■□□□□ 0.73
CPNE1-228ENST00000498814 C7orf43Q8WVR3 580 aa19.64■□□□□ 0.73
CPNE1-228ENST00000498814 USP44Q9H0E7 712 aa19.64■□□□□ 0.73
CPNE1-228ENST00000498814 FER1L6Q2WGJ9 1857 aa19.64■□□□□ 0.73
CPNE1-228ENST00000498814 C21orf2O43822 256 aa19.63■□□□□ 0.73
CPNE1-228ENST00000498814 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-228ENST00000498814 TTLL11Q8NHH1 800 aa19.63■□□□□ 0.73
CPNE1-228ENST00000498814 TNNQ9UQP3 1299 aa19.63■□□□□ 0.73
CPNE1-228ENST00000498814 BBOX1O75936 387 aa19.62■□□□□ 0.73
CPNE1-228ENST00000498814 CSF1RP07333 972 aa19.62■□□□□ 0.73
CPNE1-228ENST00000498814 GRAPQ13588 217 aa19.62■□□□□ 0.73
CPNE1-228ENST00000498814 SOGA3Q5TF21 947 aa19.62■□□□□ 0.73
CPNE1-228ENST00000498814 GRAPLQ8TC17 118 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-228ENST00000498814 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
CPNE1-228ENST00000498814 RTL9Q8NET4 1388 aa19.61■□□□□ 0.73
CPNE1-228ENST00000498814 FOXO4P98177 505 aa19.61■□□□□ 0.73
CPNE1-228ENST00000498814 ARHGAP27Q6ZUM4 889 aa19.61■□□□□ 0.73
CPNE1-228ENST00000498814 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-228ENST00000498814 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
CPNE1-228ENST00000498814 ZNF219Q9P2Y4 722 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-228ENST00000498814 SBF1O95248 1867 aa19.6■□□□□ 0.73
CPNE1-228ENST00000498814 COL4A1P02462 1669 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 EPHA10Q5JZY3 1008 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 TMC4Q7Z404 712 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
CPNE1-228ENST00000498814 KAZALD1Q96I82 304 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 SUCLG2Q96I99 432 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-228ENST00000498814 SEC31BQ9NQW1 1179 aa19.59■□□□□ 0.73
CPNE1-228ENST00000498814 CCDC88AQ3V6T2 1871 aa19.58■□□□□ 0.73
CPNE1-228ENST00000498814 MS4A1P11836 297 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 RPS8P62241 208 aaKnown RBP19.58■□□□□ 0.72
CPNE1-228ENST00000498814 CCDC93Q567U6 631 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 SP8Q8IXZ3 490 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
CPNE1-228ENST00000498814 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 GREM2Q9H772 168 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 ATP6V0A2Q9Y487 856 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 LRRC37AA6NMS7 1700 aa19.58■□□□□ 0.72
CPNE1-228ENST00000498814 GRIPAP1Q4V328 841 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 LMBR1LQ6UX01 489 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 CDC5LQ99459 802 aaKnown RBP19.57■□□□□ 0.72
CPNE1-228ENST00000498814 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 SPEF2Q9C093 1822 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 SNED1Q8TER0 1413 aa19.57■□□□□ 0.72
CPNE1-228ENST00000498814 UBTFL1P0CB47 393 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-228ENST00000498814 RLBP1P12271 317 aa19.56■□□□□ 0.72
CPNE1-228ENST00000498814 OLFM4Q6UX06 510 aa19.56■□□□□ 0.72
CPNE1-228ENST00000498814 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-228ENST00000498814 TMX4Q9H1E5 349 aaPredicted RBP19.56■□□□□ 0.72
CPNE1-228ENST00000498814 LTBP3Q9NS15 1303 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 NFKBIEO00221 500 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 GNAI3P08754 354 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 ITGA6P23229 1130 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 FAM161AQ3B820 660 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-228ENST00000498814 ANKRD18AQ8IVF6 992 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 MEIS3Q99687 375 aa19.55■□□□□ 0.72
CPNE1-228ENST00000498814 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
CPNE1-228ENST00000498814 PLIN1O60240 522 aa19.54■□□□□ 0.72
CPNE1-228ENST00000498814 ANKRD44Q8N8A2 993 aa19.54■□□□□ 0.72
CPNE1-228ENST00000498814 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
CPNE1-228ENST00000498814 DICER1Q9UPY3 1922 aaKnown RBP19.54■□□□□ 0.72
CPNE1-228ENST00000498814 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
CPNE1-228ENST00000498814 IFIT5Q13325 482 aaKnown RBP19.53■□□□□ 0.72
CPNE1-228ENST00000498814 TAOK3Q9H2K8 898 aa19.53■□□□□ 0.72
CPNE1-228ENST00000498814 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
CPNE1-228ENST00000498814 FKBP4Q02790 459 aaKnown RBP eCLIP19.52■□□□□ 0.72
CPNE1-228ENST00000498814 RASSF7Q02833 373 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 CCDC57Q2TAC2 916 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 SLC51AQ86UW1 340 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 PSMD1Q99460 953 aa19.52■□□□□ 0.72
CPNE1-228ENST00000498814 BSDC1Q9NW68 430 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-228ENST00000498814 LMNB1P20700 586 aa19.51■□□□□ 0.71
CPNE1-228ENST00000498814 IGHMBP2P38935 993 aaKnown RBP19.51■□□□□ 0.71
CPNE1-228ENST00000498814 LRRFIP2Q9Y608 721 aaKnown RBP19.51■□□□□ 0.71
CPNE1-228ENST00000498814 LTBP1Q14766 1721 aa19.51■□□□□ 0.71
CPNE1-228ENST00000498814 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-228ENST00000498814 PRELPP51888 382 aa19.5■□□□□ 0.71
CPNE1-228ENST00000498814 MPNDQ8N594 471 aa19.5■□□□□ 0.71
CPNE1-228ENST00000498814 GNAI2P04899 355 aa19.49■□□□□ 0.71
CPNE1-228ENST00000498814 DPP8Q6V1X1 898 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-228ENST00000498814 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
CPNE1-228ENST00000498814 RTFDC1Q9BY42 306 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-228ENST00000498814 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
CPNE1-228ENST00000498814 C9orf131Q5VYM1 1079 aa19.48■□□□□ 0.71
CPNE1-228ENST00000498814 PODXL2Q9NZ53 605 aa19.48■□□□□ 0.71
CPNE1-228ENST00000498814 RNF181Q9P0P0 153 aa19.48■□□□□ 0.71
CPNE1-228ENST00000498814 DUOX1Q9NRD9 1551 aa19.48■□□□□ 0.71
CPNE1-228ENST00000498814 GPSM2P81274 684 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 SUPT20HQ8NEM7 779 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
CPNE1-228ENST00000498814 ZNF277Q9NRM2 450 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms