RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 RSBN1LQ6PCB5 846 aaPredicted RBP9.72□□□□□ -0.85
CDC42-205ENST00000498236 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
CDC42-205ENST00000498236 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
CDC42-205ENST00000498236 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
CDC42-205ENST00000498236 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
CDC42-205ENST00000498236 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
CDC42-205ENST00000498236 SHANK3Q9BYB0 1731 aa9.71□□□□□ -0.85
CDC42-205ENST00000498236 SOWAHBA6NEL2 793 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 MOXD2PA6NHM9 499 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 KDM4AO75164 1064 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 GJA5P36382 358 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 GCGRP47871 477 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 TNNQ9UQP3 1299 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 RGS12O14924 1447 aa9.71□□□□□ -0.86
CDC42-205ENST00000498236 CACNA1FO60840 1977 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 USP46P62068 366 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 MCM6Q14566 821 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 PPP2R2DQ66LE6 453 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 ZNF790Q6PG37 636 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 CENPQQ7L2Z9 268 aaPredicted RBP9.7□□□□□ -0.86
CDC42-205ENST00000498236 STK31Q9BXU1 1019 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 SPATA31A1Q5TZJ5 1347 aa9.7□□□□□ -0.86
CDC42-205ENST00000498236 GIGYF1O75420 1035 aaPredicted RBP9.69□□□□□ -0.86
CDC42-205ENST00000498236 LRP6O75581 1613 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 ADAMTS2O95450 1211 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 SLC10A3P09131 477 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 RFC5P40937 340 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 BCAMP50895 628 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 HDGFL1Q5TGJ6 251 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 SPATA31A5Q5VU36 1347 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 INTS3Q68E01 1043 aaKnown RBP9.69□□□□□ -0.86
CDC42-205ENST00000498236 SPATA31A7Q8IWB4 1347 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 SLF2Q8IX21 1173 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 TMEM57Q8N5G2 664 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
CDC42-205ENST00000498236 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
CDC42-205ENST00000498236 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 KCNQ3O43525 872 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 NDUFV2P19404 249 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 CABP4P57796 275 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 KCNC4Q03721 635 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 ITPRIPQ8IWB1 547 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 FNBP4Q8N3X1 1017 aaPredicted RBP9.68□□□□□ -0.86
CDC42-205ENST00000498236 BANK1Q8NDB2 785 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 ZBTB40Q9NUA8 1239 aa9.68□□□□□ -0.86
CDC42-205ENST00000498236 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
CDC42-205ENST00000498236 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
CDC42-205ENST00000498236 TCERG1O14776 1098 aaKnown RBP9.67□□□□□ -0.86
CDC42-205ENST00000498236 ZBTB7BO15156 539 aaPredicted RBP9.67□□□□□ -0.86
CDC42-205ENST00000498236 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
CDC42-205ENST00000498236 UNC5CLQ8IV45 518 aa9.67□□□□□ -0.86
CDC42-205ENST00000498236 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
CDC42-205ENST00000498236 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
CDC42-205ENST00000498236 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.66□□□□□ -0.86
CDC42-205ENST00000498236 EXOC5O00471 708 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 HOXA2O43364 376 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 VPS72Q15906 364 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 G2E3Q7L622 706 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
CDC42-205ENST00000498236 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
CDC42-205ENST00000498236 PCDHB15Q9Y5E8 787 aa9.66□□□□□ -0.86
CDC42-205ENST00000498236 UBR2Q8IWV8 1755 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 A6NJR5 290 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 LILRB3O75022 631 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
CDC42-205ENST00000498236 CCT4P50991 539 aaKnown RBP9.65□□□□□ -0.86
CDC42-205ENST00000498236 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.86
CDC42-205ENST00000498236 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 ZNF496Q96IT1 587 aaPredicted RBP9.65□□□□□ -0.86
CDC42-205ENST00000498236 FMNL2Q96PY5 1086 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 RWDD1Q9H446 243 aaPredicted RBP9.65□□□□□ -0.86
CDC42-205ENST00000498236 WBP1LQ9NX94 342 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 GLI3P10071 1580 aa9.65□□□□□ -0.86
CDC42-205ENST00000498236 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
CDC42-205ENST00000498236 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
CDC42-205ENST00000498236 HSPA1LP34931 641 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 SLC39A6Q13433 755 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 Q6ZNB5 142 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 NGLY1Q96IV0 654 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 HYPKQ9NX55 129 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 CHPF2Q9P2E5 772 aa9.64□□□□□ -0.87
CDC42-205ENST00000498236 N4BP2Q86UW6 1770 aaPredicted RBP9.64□□□□□ -0.87
CDC42-205ENST00000498236 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 KCPQ6ZWJ8 1503 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 IGHDP01880 384 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 FDX1P10109 184 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 EIF2S2P20042 333 aaKnown RBP9.63□□□□□ -0.87
CDC42-205ENST00000498236 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
CDC42-205ENST00000498236 QPCTQ16769 361 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
CDC42-205ENST00000498236 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
CDC42-205ENST00000498236 DDX21Q9NR30 783 aaKnown RBP eCLIP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms