RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 GPTP24298 496 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 KLHDC4Q8TBB5 520 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 STAP2Q9UGK3 403 aa9.9□□□□□ -0.82
PDZRN3-212ENST00000498048 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.83
PDZRN3-212ENST00000498048 UBN2Q6ZU65 1347 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 TRIM6-TRIM34B2RNG4 842 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 IFIT2P09913 472 aaKnown RBP9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 RFX5P48382 616 aaPredicted RBP9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 FOXO4P98177 505 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 HLFQ16534 295 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 INTS5Q6P9B9 1019 aaKnown RBP9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 LMBR1LQ6UX01 489 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 AACSQ86V21 672 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 NLRP10Q86W26 655 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 COPRSQ9NQ92 184 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 TBC1D2BQ9UPU7 963 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 LRRC37AA6NMS7 1700 aa9.89□□□□□ -0.83
PDZRN3-212ENST00000498048 COL4A1P02462 1669 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 ERC2O15083 957 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 TRIM28Q13263 835 aaKnown RBP9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 PI4K2BQ8TCG2 481 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 PLA2G12BQ9BX93 195 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 CCNL1Q9UK58 526 aaPredicted RBP9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 ZNF652Q9Y2D9 606 aa9.88□□□□□ -0.83
PDZRN3-212ENST00000498048 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 GLRX3O76003 335 aaKnown RBP9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 SASH1O94885 1247 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 CAMTA2O94983 1202 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 PTF1AQ7RTS3 328 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 CNTROBQ8N137 903 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 QTRT2Q9H974 415 aaKnown RBP9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 ECHDC1Q9NTX5 307 aa9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
PDZRN3-212ENST00000498048 LAMB1P07942 1786 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 ONECUT3O60422 494 aaPredicted RBP9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 CTSWP56202 376 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 BECN1Q14457 450 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 TAF7LQ5H9L4 462 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 ZNF34Q8IZ26 560 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 TLR7Q9NYK1 1049 aaKnown RBP9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 TRMT112Q9UI30 125 aaKnown RBP9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 RFX7Q2KHR2 1363 aa9.86□□□□□ -0.83
PDZRN3-212ENST00000498048 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 IRS4O14654 1257 aaPredicted RBP9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 GNPATO15228 680 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 REC8O95072 547 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 MAP4K4O95819 1239 aaPredicted RBP9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 RBM25P49756 843 aaKnown RBP9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 TFCP2Q12800 502 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 TNNI3KQ59H18 835 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 FPGT-TNNI3KV9GXZ4 949 aa9.85□□□□□ -0.83
PDZRN3-212ENST00000498048 EYA2O00167 538 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 PDE8AO60658 829 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 CIAO1O76071 339 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 IL15P40933 162 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 KCNQ4P56696 695 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 KRT27Q7Z3Y8 459 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 EAF2Q96CJ1 260 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 CCDC85AQ96PX6 553 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 ESYT1Q9BSJ8 1104 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 CCDC8Q9H0W5 538 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 NIP7Q9Y221 180 aaKnown RBP eCLIP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 ABCC12Q96J65 1359 aa9.84□□□□□ -0.83
PDZRN3-212ENST00000498048 DLEC1Q9Y238 1755 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 FAM177BA6PVY3 158 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 NTSR2O95665 410 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 RC3H1Q5TC82 1133 aaKnown RBP9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 FAM196AQ6ZSG2 479 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 AK7Q96M32 723 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 UTP14AQ9BVJ6 771 aaKnown RBP9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 DBNLQ9UJU6 430 aaKnown RBP9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 RTL9Q8NET4 1388 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 MYH15Q9Y2K3 1946 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 CDK5RAP2Q96SN8 1893 aa9.83□□□□□ -0.84
PDZRN3-212ENST00000498048 ECM29Q5VYK3 1845 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 ANKRD18BA2A2Z9 1011 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 RGL2O15211 777 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 ITGA6P23229 1130 aa9.82□□□□□ -0.84
PDZRN3-212ENST00000498048 CHMLP26374 656 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms