RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 VPS33BQ9H267 617 aa26.27■■□□□ 1.8
LMBR1-219ENST00000498034 ADAMTSL1Q8N6G6 1762 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 PASKQ96RG2 1323 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 SF3B3Q15393 1217 aaKnown RBP26.26■■□□□ 1.79
LMBR1-219ENST00000498034 CCDC27Q2M243 656 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 CCDC30Q5VVM6 783 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 PNMA8AQ86V59 439 aaPredicted RBP26.26■■□□□ 1.79
LMBR1-219ENST00000498034 MYD88Q99836 296 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 MRS2Q9HD23 443 aa26.26■■□□□ 1.79
LMBR1-219ENST00000498034 LTBP1Q14766 1721 aa26.25■■□□□ 1.79
LMBR1-219ENST00000498034 IRS4O14654 1257 aaPredicted RBP26.25■■□□□ 1.79
LMBR1-219ENST00000498034 ANP32CO43423 234 aa26.25■■□□□ 1.79
LMBR1-219ENST00000498034 WWC1Q8IX03 1113 aa26.25■■□□□ 1.79
LMBR1-219ENST00000498034 CREBZFQ9NS37 354 aa26.25■■□□□ 1.79
LMBR1-219ENST00000498034 ITGBL1O95965 494 aaPredicted RBP26.24■■□□□ 1.79
LMBR1-219ENST00000498034 SCNN1DP51172 638 aa26.24■■□□□ 1.79
LMBR1-219ENST00000498034 CELF1Q92879 486 aaKnown RBP26.24■■□□□ 1.79
LMBR1-219ENST00000498034 LMOD1P29536 600 aaPredicted RBP26.23■■□□□ 1.79
LMBR1-219ENST00000498034 EPS15P42566 896 aa26.23■■□□□ 1.79
LMBR1-219ENST00000498034 TMC4Q7Z404 712 aa26.23■■□□□ 1.79
LMBR1-219ENST00000498034 ZNRF3Q9ULT6 936 aa26.23■■□□□ 1.79
LMBR1-219ENST00000498034 COL4A1P02462 1669 aa26.22■■□□□ 1.79
LMBR1-219ENST00000498034 KIAA2012Q0VF49 1180 aa26.22■■□□□ 1.79
LMBR1-219ENST00000498034 IFFO2Q5TF58 517 aa26.22■■□□□ 1.79
LMBR1-219ENST00000498034 MAP1SQ66K74 1059 aaPredicted RBP26.22■■□□□ 1.79
LMBR1-219ENST00000498034 ZBTB38Q8NAP3 1195 aaPredicted RBP26.22■■□□□ 1.79
LMBR1-219ENST00000498034 CXCL9Q07325 125 aa26.21■■□□□ 1.79
LMBR1-219ENST00000498034 CHMP4AQ9BY43 222 aa26.21■■□□□ 1.79
LMBR1-219ENST00000498034 LRRC37AA6NMS7 1700 aa26.21■■□□□ 1.79
LMBR1-219ENST00000498034 DDX58O95786 925 aaKnown RBP26.2■■□□□ 1.78
LMBR1-219ENST00000498034 CNTROBQ8N137 903 aa26.2■■□□□ 1.78
LMBR1-219ENST00000498034 CCDC191Q8NCU4 936 aa26.2■■□□□ 1.78
LMBR1-219ENST00000498034 JARID2Q92833 1246 aaPredicted RBP26.2■■□□□ 1.78
LMBR1-219ENST00000498034 METTL22Q9BUU2 404 aaPredicted RBP26.2■■□□□ 1.78
LMBR1-219ENST00000498034 MKRN1Q9UHC7 482 aaKnown RBP26.2■■□□□ 1.78
LMBR1-219ENST00000498034 DUOX1Q9NRD9 1551 aa26.2■■□□□ 1.78
LMBR1-219ENST00000498034 NSFL1CQ9UNZ2 370 aaKnown RBP26.18■■□□□ 1.78
LMBR1-219ENST00000498034 MAP3K2Q9Y2U5 619 aa26.18■■□□□ 1.78
LMBR1-219ENST00000498034 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
LMBR1-219ENST00000498034 PCCAP05165 728 aaPredicted RBP26.17■■□□□ 1.78
LMBR1-219ENST00000498034 TWISTNBQ3B726 338 aaPredicted RBP26.17■■□□□ 1.78
LMBR1-219ENST00000498034 CWC25Q9NXE8 425 aaPredicted RBP26.17■■□□□ 1.78
LMBR1-219ENST00000498034 IL16Q14005 1332 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 TMEM88BA6NKF7 163 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 RAD17O75943 681 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 RPS8P62241 208 aaKnown RBP26.16■■□□□ 1.78
LMBR1-219ENST00000498034 GPSM2P81274 684 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 CIAPIN1Q6FI81 312 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 KSR2Q6VAB6 950 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 STK31Q9BXU1 1019 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 SEC31BQ9NQW1 1179 aa26.16■■□□□ 1.78
LMBR1-219ENST00000498034 PI4KAP2A4QPH2 592 aa26.15■■□□□ 1.78
LMBR1-219ENST00000498034 NCBP3Q53F19 620 aaKnown RBP26.15■■□□□ 1.78
LMBR1-219ENST00000498034 PI4KAP1Q8N8J0 262 aa26.15■■□□□ 1.78
LMBR1-219ENST00000498034 GPRC5DQ9NZD1 345 aa26.15■■□□□ 1.78
LMBR1-219ENST00000498034 YDJCA8MPS7 323 aa26.14■■□□□ 1.78
LMBR1-219ENST00000498034 PDE8AO60658 829 aa26.14■■□□□ 1.78
LMBR1-219ENST00000498034 HSP90B1P14625 803 aaKnown RBP26.14■■□□□ 1.78
LMBR1-219ENST00000498034 GMPSP49915 693 aaPredicted RBP26.14■■□□□ 1.78
LMBR1-219ENST00000498034 WASHC4Q2M389 1173 aa26.14■■□□□ 1.78
LMBR1-219ENST00000498034 USP50Q70EL3 339 aaPredicted RBP26.14■■□□□ 1.78
LMBR1-219ENST00000498034 G2E3Q7L622 706 aa26.14■■□□□ 1.78
LMBR1-219ENST00000498034 POLLQ9UGP5 575 aa26.14■■□□□ 1.78
LMBR1-219ENST00000498034 CNTNAP1P78357 1384 aa26.13■■□□□ 1.77
LMBR1-219ENST00000498034 C6orf229H3BNL8 230 aa26.13■■□□□ 1.77
LMBR1-219ENST00000498034 RIMBP2O15034 1052 aa26.13■■□□□ 1.77
LMBR1-219ENST00000498034 IGKV5-2P06315 115 aa26.13■■□□□ 1.77
LMBR1-219ENST00000498034 HSPA1AP0DMV8 641 aaKnown RBP26.13■■□□□ 1.77
LMBR1-219ENST00000498034 HSPA1BP0DMV9 641 aaKnown RBP26.13■■□□□ 1.77
LMBR1-219ENST00000498034 CCDC85AQ96PX6 553 aaPredicted RBP26.13■■□□□ 1.77
LMBR1-219ENST00000498034 SLC4A2P04920 1241 aa26.12■■□□□ 1.77
LMBR1-219ENST00000498034 ADARB2Q9NS39 739 aaKnown RBP26.12■■□□□ 1.77
LMBR1-219ENST00000498034 FMR1Q06787 632 aaKnown RBP eCLIP26.11■■□□□ 1.771e-12■■■■□ 24.2
LMBR1-219ENST00000498034 TNIP1Q15025 636 aa26.11■■□□□ 1.77
LMBR1-219ENST00000498034 CCDC152Q4G0S7 254 aa26.11■■□□□ 1.77
LMBR1-219ENST00000498034 GPR101Q96P66 508 aaPredicted RBP26.11■■□□□ 1.77
LMBR1-219ENST00000498034 BCL2L13Q9BXK5 485 aa26.11■■□□□ 1.77
LMBR1-219ENST00000498034 DBNDD1Q9H9R9 158 aa26.11■■□□□ 1.77
LMBR1-219ENST00000498034 FANCIQ9NVI1 1328 aa26.11■■□□□ 1.77
LMBR1-219ENST00000498034 COL13A1Q5TAT6 717 aaPredicted RBP26.1■■□□□ 1.77
LMBR1-219ENST00000498034 NEXNQ0ZGT2 675 aa26.09■■□□□ 1.77
LMBR1-219ENST00000498034 CWF19L2Q2TBE0 894 aaKnown RBP26.09■■□□□ 1.77
LMBR1-219ENST00000498034 WDR63Q8IWG1 891 aa26.09■■□□□ 1.77
LMBR1-219ENST00000498034 TBC1D16Q8TBP0 767 aa26.09■■□□□ 1.77
LMBR1-219ENST00000498034 CDHR2Q9BYE9 1310 aa26.09■■□□□ 1.77
LMBR1-219ENST00000498034 EYA3Q99504 573 aa26.08■■□□□ 1.77
LMBR1-219ENST00000498034 SHTN1A0MZ66 631 aa26.07■■□□□ 1.76
LMBR1-219ENST00000498034 VEGFBP49765 207 aa26.07■■□□□ 1.76
LMBR1-219ENST00000498034 DOK7Q18PE1 504 aa26.07■■□□□ 1.76
LMBR1-219ENST00000498034 FAM9BQ8IZU0 186 aa26.07■■□□□ 1.76
LMBR1-219ENST00000498034 ZBTB12Q9Y330 459 aaPredicted RBP26.07■■□□□ 1.76
LMBR1-219ENST00000498034 NEURL1BA8MQ27 555 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 TRAF5O00463 557 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 PSMD14O00487 310 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 ECE2O60344 883 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 KCNQ5Q9NR82 932 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 PODXL2Q9NZ53 605 aa26.06■■□□□ 1.76
LMBR1-219ENST00000498034 CNOT7Q9UIV1 285 aaKnown RBP26.06■■□□□ 1.76
LMBR1-219ENST00000498034 VAMP4O75379 141 aa26.05■■□□□ 1.76
LMBR1-219ENST00000498034 HIRAP54198 1017 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms