RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MPNDQ8N594 471 aa16.75■□□□□ 0.27
FN1-226ENST00000496542 C8orf58Q8NAV2 365 aa16.75■□□□□ 0.27
FN1-226ENST00000496542 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
FN1-226ENST00000496542 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
FN1-226ENST00000496542 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
FN1-226ENST00000496542 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
FN1-226ENST00000496542 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
FN1-226ENST00000496542 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
FN1-226ENST00000496542 EPS15P42566 896 aa16.73■□□□□ 0.27
FN1-226ENST00000496542 SCNN1DP51172 638 aa16.73■□□□□ 0.27
FN1-226ENST00000496542 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
FN1-226ENST00000496542 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
FN1-226ENST00000496542 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
FN1-226ENST00000496542 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
FN1-226ENST00000496542 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
FN1-226ENST00000496542 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
FN1-226ENST00000496542 MYD88Q99836 296 aa16.72■□□□□ 0.27
FN1-226ENST00000496542 ZNRF3Q9ULT6 936 aa16.72■□□□□ 0.27
FN1-226ENST00000496542 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
FN1-226ENST00000496542 KIAA2012Q0VF49 1180 aa16.71■□□□□ 0.27
FN1-226ENST00000496542 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
FN1-226ENST00000496542 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
FN1-226ENST00000496542 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
FN1-226ENST00000496542 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
FN1-226ENST00000496542 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
FN1-226ENST00000496542 COL4A1P02462 1669 aa16.71■□□□□ 0.27
FN1-226ENST00000496542 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
FN1-226ENST00000496542 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
FN1-226ENST00000496542 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
FN1-226ENST00000496542 CXCL9Q07325 125 aa16.7■□□□□ 0.26
FN1-226ENST00000496542 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
FN1-226ENST00000496542 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
FN1-226ENST00000496542 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
FN1-226ENST00000496542 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
FN1-226ENST00000496542 RAD17O75943 681 aa16.69■□□□□ 0.26
FN1-226ENST00000496542 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
FN1-226ENST00000496542 ANP32CO43423 234 aa16.68■□□□□ 0.26
FN1-226ENST00000496542 GMPSP49915 693 aaPredicted RBP16.68■□□□□ 0.26
FN1-226ENST00000496542 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
FN1-226ENST00000496542 CIAPIN1Q6FI81 312 aa16.68■□□□□ 0.26
FN1-226ENST00000496542 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
FN1-226ENST00000496542 JARID2Q92833 1246 aaPredicted RBP16.68■□□□□ 0.26
FN1-226ENST00000496542 METTL22Q9BUU2 404 aaPredicted RBP16.68■□□□□ 0.26
FN1-226ENST00000496542 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
FN1-226ENST00000496542 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
FN1-226ENST00000496542 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
FN1-226ENST00000496542 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
FN1-226ENST00000496542 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
FN1-226ENST00000496542 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
FN1-226ENST00000496542 COL13A1Q5TAT6 717 aaPredicted RBP16.67■□□□□ 0.26
FN1-226ENST00000496542 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
FN1-226ENST00000496542 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
FN1-226ENST00000496542 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
FN1-226ENST00000496542 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
FN1-226ENST00000496542 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
FN1-226ENST00000496542 YDJCA8MPS7 323 aa16.66■□□□□ 0.26
FN1-226ENST00000496542 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
FN1-226ENST00000496542 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
FN1-226ENST00000496542 GPSM2P81274 684 aa16.66■□□□□ 0.26
FN1-226ENST00000496542 TNIP1Q15025 636 aa16.66■□□□□ 0.26
FN1-226ENST00000496542 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
FN1-226ENST00000496542 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
FN1-226ENST00000496542 RIMBP2O15034 1052 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
FN1-226ENST00000496542 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
FN1-226ENST00000496542 POLLQ9UGP5 575 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 ABT1Q9ULW3 272 aaKnown RBP16.65■□□□□ 0.26
FN1-226ENST00000496542 TRPM7Q96QT4 1865 aa16.65■□□□□ 0.26
FN1-226ENST00000496542 PI4KAP2A4QPH2 592 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 PDE8AO60658 829 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 VEGFBP49765 207 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
FN1-226ENST00000496542 PI4KAP1Q8N8J0 262 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
FN1-226ENST00000496542 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
FN1-226ENST00000496542 IL16Q14005 1332 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
FN1-226ENST00000496542 MYH3P11055 1940 aa16.63■□□□□ 0.25
FN1-226ENST00000496542 TRAF5O00463 557 aa16.63■□□□□ 0.25
FN1-226ENST00000496542 EYA3Q99504 573 aa16.63■□□□□ 0.25
FN1-226ENST00000496542 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 ECE2O60344 883 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 IGKV5-2P06315 115 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 DOK7Q18PE1 504 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 G2E3Q7L622 706 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 ANKIB1Q9P2G1 1089 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
FN1-226ENST00000496542 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 PSMD14O00487 310 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 UFL1O94874 794 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 DEFB115Q30KQ5 88 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
FN1-226ENST00000496542 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms