RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-213ENST00000496347 CWC25Q9NXE8 425 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-213ENST00000496347 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-213ENST00000496347 KSR2Q6VAB6 950 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 SP8Q8IXZ3 490 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 GPC2Q8N158 579 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 MYH16Q9H6N6 1097 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
HDAC4-213ENST00000496347 COL4A1P02462 1669 aa20.17■□□□□ 0.82
HDAC4-213ENST00000496347 TCERG1O14776 1098 aaKnown RBP20.17■□□□□ 0.82
HDAC4-213ENST00000496347 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-213ENST00000496347 ZNF428Q96B54 188 aa20.17■□□□□ 0.82
HDAC4-213ENST00000496347 PI4KAP2A4QPH2 592 aa20.16■□□□□ 0.82
HDAC4-213ENST00000496347 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
HDAC4-213ENST00000496347 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
HDAC4-213ENST00000496347 NIM1KQ8IY84 436 aa20.16■□□□□ 0.82
HDAC4-213ENST00000496347 PI4KAP1Q8N8J0 262 aa20.16■□□□□ 0.82
HDAC4-213ENST00000496347 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-213ENST00000496347 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
HDAC4-213ENST00000496347 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-213ENST00000496347 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
HDAC4-213ENST00000496347 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 FLIIQ13045 1269 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 MPNDQ8N594 471 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 TAF1DQ9H5J8 278 aaPredicted RBP20.14■□□□□ 0.81
HDAC4-213ENST00000496347 HACL1Q9UJ83 578 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 PCNTO95613 3336 aa20.14■□□□□ 0.81
HDAC4-213ENST00000496347 AOC3Q16853 763 aa20.13■□□□□ 0.81
HDAC4-213ENST00000496347 CCDC152Q4G0S7 254 aa20.13■□□□□ 0.81
HDAC4-213ENST00000496347 LDHDQ86WU2 507 aa20.13■□□□□ 0.81
HDAC4-213ENST00000496347 PDE8AO60658 829 aa20.12■□□□□ 0.81
HDAC4-213ENST00000496347 VAMP4O75379 141 aa20.12■□□□□ 0.81
HDAC4-213ENST00000496347 IGKV5-2P06315 115 aa20.12■□□□□ 0.81
HDAC4-213ENST00000496347 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
HDAC4-213ENST00000496347 KIAA2012Q0VF49 1180 aa20.12■□□□□ 0.81
HDAC4-213ENST00000496347 CHADLQ6NUI6 762 aa20.12■□□□□ 0.81
HDAC4-213ENST00000496347 CELF1Q92879 486 aaKnown RBP20.12■□□□□ 0.81
HDAC4-213ENST00000496347 SPEF2Q9C093 1822 aa20.11■□□□□ 0.81
HDAC4-213ENST00000496347 NEURL1BA8MQ27 555 aa20.11■□□□□ 0.81
HDAC4-213ENST00000496347 FKBP5Q13451 457 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-213ENST00000496347 G2E3Q7L622 706 aa20.11■□□□□ 0.81
HDAC4-213ENST00000496347 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-213ENST00000496347 RTL9Q8NET4 1388 aa20.1■□□□□ 0.81
HDAC4-213ENST00000496347 EPHX2P34913 555 aa20.1■□□□□ 0.81
HDAC4-213ENST00000496347 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-213ENST00000496347 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
HDAC4-213ENST00000496347 LMOD1P29536 600 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-213ENST00000496347 CTSWP56202 376 aa20.09■□□□□ 0.81
HDAC4-213ENST00000496347 RPS8P62241 208 aaKnown RBP20.09■□□□□ 0.81
HDAC4-213ENST00000496347 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
HDAC4-213ENST00000496347 POTEIP0CG38 1075 aa20.08■□□□□ 0.81
HDAC4-213ENST00000496347 POTEJP0CG39 1038 aa20.08■□□□□ 0.81
HDAC4-213ENST00000496347 CWF19L2Q2TBE0 894 aaKnown RBP20.08■□□□□ 0.81
HDAC4-213ENST00000496347 GJA3Q9Y6H8 435 aa20.08■□□□□ 0.81
HDAC4-213ENST00000496347 SCNN1DP51172 638 aa20.07■□□□□ 0.8
HDAC4-213ENST00000496347 DNAJC5GQ8N7S2 189 aa20.07■□□□□ 0.8
HDAC4-213ENST00000496347 LINS1Q8NG48 757 aa20.07■□□□□ 0.8
HDAC4-213ENST00000496347 NSFL1CQ9UNZ2 370 aaKnown RBP20.07■□□□□ 0.8
HDAC4-213ENST00000496347 GCKRQ14397 625 aa20.06■□□□□ 0.8
HDAC4-213ENST00000496347 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
HDAC4-213ENST00000496347 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
HDAC4-213ENST00000496347 PSME4Q14997 1843 aa20.06■□□□□ 0.8
HDAC4-213ENST00000496347 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 GPSM2P81274 684 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 UBE3BQ7Z3V4 1068 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 KLRG1Q96E93 195 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 EYA3Q99504 573 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 SEC31BQ9NQW1 1179 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 PODXL2Q9NZ53 605 aa20.05■□□□□ 0.8
HDAC4-213ENST00000496347 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
HDAC4-213ENST00000496347 CXCL9Q07325 125 aa20.04■□□□□ 0.8
HDAC4-213ENST00000496347 WASHC4Q2M389 1173 aa20.04■□□□□ 0.8
HDAC4-213ENST00000496347 ANKRD18AQ8IVF6 992 aa20.04■□□□□ 0.8
HDAC4-213ENST00000496347 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-213ENST00000496347 PLA2G12BQ9BX93 195 aa20.04■□□□□ 0.8
HDAC4-213ENST00000496347 E9PSI1 815 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 H7C1W4 665 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 HTRA3P83110 453 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 TNIP1Q15025 636 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 CIAPIN1Q6FI81 312 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 GPRC5DQ9NZD1 345 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 POLLQ9UGP5 575 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
HDAC4-213ENST00000496347 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
HDAC4-213ENST00000496347 TTLL11Q8NHH1 800 aa20.02■□□□□ 0.8
HDAC4-213ENST00000496347 TBC1D16Q8TBP0 767 aa20.02■□□□□ 0.8
HDAC4-213ENST00000496347 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
HDAC4-213ENST00000496347 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
HDAC4-213ENST00000496347 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
HDAC4-213ENST00000496347 XDHP47989 1333 aa20.02■□□□□ 0.79
HDAC4-213ENST00000496347 YDJCA8MPS7 323 aa20.01■□□□□ 0.79
HDAC4-213ENST00000496347 UFL1O94874 794 aa20.01■□□□□ 0.79
HDAC4-213ENST00000496347 CASP7P55210 303 aa20.01■□□□□ 0.79
HDAC4-213ENST00000496347 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-213ENST00000496347 GREM2Q9H772 168 aa20.01■□□□□ 0.79
HDAC4-213ENST00000496347 GGA1Q9UJY5 639 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms