RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 DDX11Q96FC9 970 aa14.36□□□□□ -0.11
HCN3-204ENST00000496230 GREM2Q9H772 168 aa14.36□□□□□ -0.11
HCN3-204ENST00000496230 WTIPA6NIX2 430 aaPredicted RBP14.36□□□□□ -0.11
HCN3-204ENST00000496230 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
HCN3-204ENST00000496230 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
HCN3-204ENST00000496230 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
HCN3-204ENST00000496230 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
HCN3-204ENST00000496230 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
HCN3-204ENST00000496230 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
HCN3-204ENST00000496230 CHMP4CQ96CF2 233 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 LRRC37A3O60309 1634 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 RAD50Q92878 1312 aa14.35□□□□□ -0.11
HCN3-204ENST00000496230 FIBPO43427 364 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
HCN3-204ENST00000496230 SCARF1Q14162 830 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 METTL24Q5JXM2 366 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 H7C1W4 665 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
HCN3-204ENST00000496230 TCIRG1Q13488 830 aa14.34□□□□□ -0.11
HCN3-204ENST00000496230 CPDO75976 1380 aa14.33□□□□□ -0.11
HCN3-204ENST00000496230 CEBPZQ03701 1054 aaKnown RBP14.33□□□□□ -0.12
HCN3-204ENST00000496230 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
HCN3-204ENST00000496230 CCDC171Q6TFL3 1326 aa14.33□□□□□ -0.12
HCN3-204ENST00000496230 ITGA6P23229 1130 aa14.33□□□□□ -0.12
HCN3-204ENST00000496230 SEC31BQ9NQW1 1179 aa14.33□□□□□ -0.12
HCN3-204ENST00000496230 SMC3Q9UQE7 1217 aa14.33□□□□□ -0.12
HCN3-204ENST00000496230 IRS4O14654 1257 aaPredicted RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 APPP05067 770 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 COPRSQ9NQ92 184 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 SLC27A2O14975 620 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 NPHP1O15259 732 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 CASP7P55210 303 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 NUCB2P80303 420 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 TTC39AQ5SRH9 613 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 IDH1O75874 414 aaKnown RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 CCT2P78371 535 aaKnown RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
HCN3-204ENST00000496230 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
HCN3-204ENST00000496230 EYA2O00167 538 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 ME3Q16798 604 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 ZMYND15Q9H091 742 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 PHF14O94880 888 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
HCN3-204ENST00000496230 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
HCN3-204ENST00000496230 SYCE3A1L190 88 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 GJB2P29033 226 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 XAGE2Q96GT9 111 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 DCCP43146 1447 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 LMO7Q8WWI1 1683 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 CYP19A1P11511 503 aaPredicted RBP14.3□□□□□ -0.12
HCN3-204ENST00000496230 ZAP70P43403 619 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 GUCY1B3Q02153 619 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
HCN3-204ENST00000496230 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
HCN3-204ENST00000496230 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
HCN3-204ENST00000496230 C5P01031 1676 aa14.29□□□□□ -0.12
HCN3-204ENST00000496230 UTYO14607 1347 aa14.29□□□□□ -0.12
HCN3-204ENST00000496230 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
HCN3-204ENST00000496230 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
HCN3-204ENST00000496230 INCENPQ9NQS7 918 aa14.29□□□□□ -0.12
HCN3-204ENST00000496230 CRKLP46109 303 aaKnown RBP14.28□□□□□ -0.12
HCN3-204ENST00000496230 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 NCOA5Q9HCD5 579 aaKnown RBP14.28□□□□□ -0.12
HCN3-204ENST00000496230 NIP7Q9Y221 180 aaKnown RBP eCLIP14.28□□□□□ -0.12
HCN3-204ENST00000496230 SYT1P21579 422 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 SLC51AQ86UW1 340 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 BRF1Q92994 677 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 KIF1AQ12756 1690 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 JAK2O60674 1132 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 ITPK1Q13572 414 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
HCN3-204ENST00000496230 STRCQ7RTU9 1775 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 CACNA1FO60840 1977 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 CYP21A2P08686 494 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 ATP5JP18859 108 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.12
HCN3-204ENST00000496230 SUSD4Q5VX71 490 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 DENND2AQ9ULE3 1009 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 COL15A1P39059 1388 aa14.27□□□□□ -0.12
HCN3-204ENST00000496230 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
HCN3-204ENST00000496230 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.13
HCN3-204ENST00000496230 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
HCN3-204ENST00000496230 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms