RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 TAF5LO75529 589 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 ADRA2BP18089 450 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 HLFQ16534 295 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 SSFA2P28290 1259 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 HDAC1Q13547 482 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 HDAC9Q9UKV0 1011 aa11.35□□□□□ -0.59
GAPVD1-219ENST00000495955 CPLX1O14810 134 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 POLR3DP05423 398 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 TRMT2AQ8IZ69 625 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 CPLX2Q6PUV4 134 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 LDHCP07864 332 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 NLRP10Q86W26 655 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 MYO1BO43795 1136 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 MPNDQ8N594 471 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
GAPVD1-219ENST00000495955 GOLGA6L4A6NEF3 574 aa11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 USP44Q9H0E7 712 aa11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.59
GAPVD1-219ENST00000495955 PSMA5P28066 241 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 TNS2Q63HR2 1409 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 ITPK1Q13572 414 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 SKAP1Q86WV1 359 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 ABCC4O15439 1325 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 TBC1D9BQ66K14 1250 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 C22orf23Q9BZE7 217 aa11.33□□□□□ -0.6
GAPVD1-219ENST00000495955 MINDY4BA8MYZ0 360 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 BAG3O95817 575 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 GSTO1P78417 241 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 NBR1Q14596 966 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 MYOM1P52179 1685 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 MPHOSPH10O00566 681 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 TIMM10P62072 90 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 SLKQ9H2G2 1235 aaPredicted RBP11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 RGPD8O14715 1765 aaPredicted RBP11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 GREM2Q9H772 168 aa11.32□□□□□ -0.6
GAPVD1-219ENST00000495955 A0A1B0GUL7 405 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 NUCB1Q02818 461 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 PPIP5K2O43314 1243 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 NBPF10Q6P3W6 841 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 NBPF15Q8N660 670 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 DCTPP1Q9H773 170 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 PPEF1O14829 653 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 EIF6P56537 245 aaKnown RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 NAPBQ9H115 298 aa11.31□□□□□ -0.6
GAPVD1-219ENST00000495955 H3BQV1 296 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 CYP7A1P22680 504 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 MARCH6O60337 910 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 RBM19Q9Y4C8 960 aaKnown RBP11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
GAPVD1-219ENST00000495955 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 MKNK2Q9HBH9 465 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 SPON1Q9HCB6 807 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 PIK3C2AO00443 1686 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
GAPVD1-219ENST00000495955 KDM4AO75164 1064 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms