RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-215	ENST00000495893	CETN3	O15182	167 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	KIF5A	Q12840	1032 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	CFAP58	Q5T655	872 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	CPLX4	Q7Z7G2	160 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	CNPY4	Q8N129	248 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	RAPGEF4	Q8WZA2	1011 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	SPATA32	Q96LK8	384 aa		4.37	□□□□□ -1.71
PHC3-215	ENST00000495893	GIGYF1	O75420	1035 aa	Predicted RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ZBTB16	Q05516	673 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	HDAC1	Q13547	482 aa	Predicted RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	RNF10	Q8N5U6	811 aa	Known RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	AFAP1L1	Q8TED9	768 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	TSNARE1	Q96NA8	513 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	STX1A	Q16623	288 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CCDC30	Q5VVM6	783 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	TTC5	Q8N0Z6	440 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	FAN1	Q9Y2M0	1017 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	TBX22	Q9Y458	520 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	NCOA1	Q15788	1441 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	RIMS1	Q86UR5	1692 aa	Known RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	PREX1	Q8TCU6	1659 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	TPD52	P55327	224 aa	Predicted RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	SLC4A8	Q2Y0W8	1093 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	FKBP15	Q5T1M5	1219 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CACNA2D4	Q7Z3S7	1137 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	PPP1R14C	Q8TAE6	165 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	NUF2	Q9BZD4	464 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ABCC3	O15438	1527 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	PLXNC1	O60486	1568 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	YEATS4	O95619	227 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CCDC77	Q9BR77	488 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	IKBKG	Q9Y6K9	419 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ATP5D	P30049	168 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	WWC2	Q6AWC2	1192 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	PRPF31	Q8WWY3	499 aa	Known RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CEP131	Q9UPN4	1083 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	NUCB1	Q02818	461 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CCDC152	Q4G0S7	254 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	MRFAP1L1	Q96HT8	127 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	LRRD1	A4D1F6	860 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	TACO1	Q9BSH4	297 aa	Known RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893		Q9H521	79 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	CDKL5	O76039	1030 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	DMTN	Q08495	405 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	C1orf141	Q5JVX7	400 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ZKSCAN5	Q9Y2L8	839 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ZFX	P17010	805 aa	Predicted RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	INTS8	Q75QN2	995 aa	Known RBP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	ARMC9	Q7Z3E5	817 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	COG6	Q9Y2V7	657 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	NEK4	P51957	841 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	BCAP29	Q9UHQ4	241 aa		4.36	□□□□□ -1.71
PHC3-215	ENST00000495893	RASEF	Q8IZ41	740 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	RABEP2	Q9H5N1	569 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	ARHGEF12	Q9NZN5	1544 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CTAGE9	A4FU28	777 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	ADCY5	O95622	1261 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	DTNBP1	Q96EV8	351 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	SELENOO	Q9BVL4	669 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	FAF1	Q9UNN5	650 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	ARHGAP31	Q2M1Z3	1444 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CTAGE15	A4D2H0	777 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CTAGE8	P0CG41	777 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CEBPA	P49715	358 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	MAP3K21	Q5TCX8	1036 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CTAGE4	Q8IX94	777 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	MICAL1	Q8TDZ2	1067 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	ATP2C2	O75185	946 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	TTC36	A6NLP5	189 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	WDHD1	O75717	1129 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	FER1L4	A9Z1Z3	1794 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	PLVAP	Q9BX97	442 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	NOL7	Q9UMY1	257 aa	Known RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	TRIM21	P19474	475 aa	Known RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	PSMC4	P43686	418 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CROCCP2	Q86T23	111 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	JAKMIP2	Q96AA8	810 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	GCC1	Q96CN9	775 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CAPZA3	Q96KX2	299 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	DCC	P43146	1447 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	RASSF2	P50749	326 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	TTC19	Q6DKK2	380 aa	Predicted RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	LARP1	Q6PKG0	1096 aa	Known RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	ERO1A	Q96HE7	468 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CCDC7	Q96M83	1385 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	SMARCC2	Q8TAQ2	1214 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	MPHOSPH9	Q99550	1183 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	TCOF1	Q13428	1488 aa	Known RBP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	VAV2	P52735	878 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	NEDD9	Q14511	834 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	TANGO6	Q9C0B7	1094 aa		4.35	□□□□□ -1.71
PHC3-215	ENST00000495893	CREB3	O43889	395 aa		4.34	□□□□□ -1.71
PHC3-215	ENST00000495893	CEP85L	Q5SZL2	805 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms