RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 HSP90B1P14625 803 aaKnown RBP24.56■■□□□ 1.52
HDAC4-212ENST00000495497 CCT4P50991 539 aaKnown RBP24.56■■□□□ 1.52
HDAC4-212ENST00000495497 SLX4Q8IY92 1834 aa24.56■■□□□ 1.52
HDAC4-212ENST00000495497 CTSWP56202 376 aa24.55■■□□□ 1.52
HDAC4-212ENST00000495497 TTLL11Q8NHH1 800 aa24.55■■□□□ 1.52
HDAC4-212ENST00000495497 C7orf43Q8WVR3 580 aa24.55■■□□□ 1.52
HDAC4-212ENST00000495497 SEC31BQ9NQW1 1179 aa24.55■■□□□ 1.52
HDAC4-212ENST00000495497 EPHA10Q5JZY3 1008 aa24.54■■□□□ 1.52
HDAC4-212ENST00000495497 CELF1Q92879 486 aaKnown RBP24.54■■□□□ 1.52
HDAC4-212ENST00000495497 PLA2G12BQ9BX93 195 aa24.54■■□□□ 1.52
HDAC4-212ENST00000495497 USP44Q9H0E7 712 aa24.54■■□□□ 1.52
HDAC4-212ENST00000495497 PPEF1O14829 653 aaPredicted RBP24.53■■□□□ 1.52
HDAC4-212ENST00000495497 GRAPQ13588 217 aa24.53■■□□□ 1.52
HDAC4-212ENST00000495497 CCDC152Q4G0S7 254 aa24.53■■□□□ 1.52
HDAC4-212ENST00000495497 GRAPLQ8TC17 118 aaPredicted RBP24.53■■□□□ 1.52
HDAC4-212ENST00000495497 SUCLG2Q96I99 432 aa24.53■■□□□ 1.52
HDAC4-212ENST00000495497 FOXO4P98177 505 aa24.52■■□□□ 1.52
HDAC4-212ENST00000495497 INTS3Q68E01 1043 aaKnown RBP24.52■■□□□ 1.52
HDAC4-212ENST00000495497 GREM2Q9H772 168 aa24.52■■□□□ 1.52
HDAC4-212ENST00000495497 UTYO14607 1347 aa24.52■■□□□ 1.52
HDAC4-212ENST00000495497 CACNA1SQ13698 1873 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 COL4A1P02462 1669 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 PLIN1O60240 522 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 RASSF7Q02833 373 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 TMEM57Q8N5G2 664 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 KAZALD1Q96I82 304 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 ARFGEF1Q9Y6D6 1849 aa24.51■■□□□ 1.51
HDAC4-212ENST00000495497 RLBP1P12271 317 aa24.5■■□□□ 1.51
HDAC4-212ENST00000495497 BBOX1O75936 387 aa24.49■■□□□ 1.51
HDAC4-212ENST00000495497 CSF1RP07333 972 aa24.49■■□□□ 1.51
HDAC4-212ENST00000495497 NFKBIEO00221 500 aa24.48■■□□□ 1.51
HDAC4-212ENST00000495497 TAF1P21675 1872 aa24.48■■□□□ 1.51
HDAC4-212ENST00000495497 FAM161AQ3B820 660 aa24.48■■□□□ 1.51
HDAC4-212ENST00000495497 LMBR1LQ6UX01 489 aa24.48■■□□□ 1.51
HDAC4-212ENST00000495497 FTSJ3Q8IY81 847 aaKnown RBP24.48■■□□□ 1.51
HDAC4-212ENST00000495497 DZIP1LQ8IYY4 767 aaKnown RBP24.48■■□□□ 1.51
HDAC4-212ENST00000495497 RPS8P62241 208 aaKnown RBP24.47■■□□□ 1.51
HDAC4-212ENST00000495497 CCDC93Q567U6 631 aa24.47■■□□□ 1.51
HDAC4-212ENST00000495497 MEIS3Q99687 375 aa24.47■■□□□ 1.51
HDAC4-212ENST00000495497 BICC1Q9H694 974 aaKnown RBP24.47■■□□□ 1.51
HDAC4-212ENST00000495497 CHMP3Q9Y3E7 222 aa24.47■■□□□ 1.51
HDAC4-212ENST00000495497 ATP6V0A2Q9Y487 856 aa24.47■■□□□ 1.51
HDAC4-212ENST00000495497 SOGA3Q5TF21 947 aa24.46■■□□□ 1.51
HDAC4-212ENST00000495497 PANK1Q8TE04 598 aa24.46■■□□□ 1.51
HDAC4-212ENST00000495497 ITGA6P23229 1130 aa24.45■■□□□ 1.5
HDAC4-212ENST00000495497 PRELPP51888 382 aa24.45■■□□□ 1.5
HDAC4-212ENST00000495497 SP8Q8IXZ3 490 aa24.45■■□□□ 1.5
HDAC4-212ENST00000495497 UBTFL1P0CB47 393 aaPredicted RBP24.44■■□□□ 1.5
HDAC4-212ENST00000495497 ANKRD44Q8N8A2 993 aa24.44■■□□□ 1.5
HDAC4-212ENST00000495497 RTL9Q8NET4 1388 aa24.43■■□□□ 1.5
HDAC4-212ENST00000495497 ANKRD18AQ8IVF6 992 aa24.43■■□□□ 1.5
HDAC4-212ENST00000495497 ITPRIPQ8IWB1 547 aa24.42■■□□□ 1.5
HDAC4-212ENST00000495497 RTKN2Q8IZC4 609 aa24.42■■□□□ 1.5
HDAC4-212ENST00000495497 CDC5LQ99459 802 aaKnown RBP24.42■■□□□ 1.5
HDAC4-212ENST00000495497 TAOK3Q9H2K8 898 aa24.42■■□□□ 1.5
HDAC4-212ENST00000495497 SNED1Q8TER0 1413 aa24.42■■□□□ 1.5
HDAC4-212ENST00000495497 ANKRD18BA2A2Z9 1011 aa24.41■■□□□ 1.5
HDAC4-212ENST00000495497 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
HDAC4-212ENST00000495497 CC2D2BQ6DHV5 1058 aa24.41■■□□□ 1.5
HDAC4-212ENST00000495497 ZNF594Q96JF6 807 aaPredicted RBP24.41■■□□□ 1.5
HDAC4-212ENST00000495497 TMX4Q9H1E5 349 aaPredicted RBP24.41■■□□□ 1.5
HDAC4-212ENST00000495497 LRRFIP2Q9Y608 721 aaKnown RBP24.41■■□□□ 1.5
HDAC4-212ENST00000495497 MYH3P11055 1940 aa24.41■■□□□ 1.5
HDAC4-212ENST00000495497 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.5
HDAC4-212ENST00000495497 IFIT5Q13325 482 aaKnown RBP24.4■■□□□ 1.5
HDAC4-212ENST00000495497 RABL6Q3YEC7 729 aaPredicted RBP24.4■■□□□ 1.5
HDAC4-212ENST00000495497 C20orf194Q5TEA3 1177 aa24.4■■□□□ 1.5
HDAC4-212ENST00000495497 TMC4Q7Z404 712 aa24.4■■□□□ 1.5
HDAC4-212ENST00000495497 GPSM2P81274 684 aa24.39■■□□□ 1.49
HDAC4-212ENST00000495497 CCDC57Q2TAC2 916 aa24.39■■□□□ 1.49
HDAC4-212ENST00000495497 ZNF277Q9NRM2 450 aaPredicted RBP24.39■■□□□ 1.49
HDAC4-212ENST00000495497 RNF181Q9P0P0 153 aa24.39■■□□□ 1.49
HDAC4-212ENST00000495497 GNAI3P08754 354 aa24.38■■□□□ 1.49
HDAC4-212ENST00000495497 IGHMBP2P38935 993 aaKnown RBP24.38■■□□□ 1.49
HDAC4-212ENST00000495497 DPP8Q6V1X1 898 aaPredicted RBP24.38■■□□□ 1.49
HDAC4-212ENST00000495497 MPNDQ8N594 471 aa24.38■■□□□ 1.49
HDAC4-212ENST00000495497 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
HDAC4-212ENST00000495497 LTBP3Q9NS15 1303 aa24.37■■□□□ 1.49
HDAC4-212ENST00000495497 MS4A1P11836 297 aa24.37■■□□□ 1.49
HDAC4-212ENST00000495497 LMNB1P20700 586 aa24.37■■□□□ 1.49
HDAC4-212ENST00000495497 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.37■■□□□ 1.49
HDAC4-212ENST00000495497 PSMD1Q99460 953 aa24.37■■□□□ 1.49
HDAC4-212ENST00000495497 BSDC1Q9NW68 430 aaPredicted RBP24.37■■□□□ 1.49
HDAC4-212ENST00000495497 NSFL1CQ9UNZ2 370 aaKnown RBP24.37■■□□□ 1.49
HDAC4-212ENST00000495497 COG6Q9Y2V7 657 aa24.37■■□□□ 1.49
HDAC4-212ENST00000495497 ZBTB7BO15156 539 aaPredicted RBP24.36■■□□□ 1.49
HDAC4-212ENST00000495497 YY1P25490 414 aa24.36■■□□□ 1.49
HDAC4-212ENST00000495497 MPHOSPH8Q99549 860 aa24.36■■□□□ 1.49
HDAC4-212ENST00000495497 MINPP1Q9UNW1 487 aa24.36■■□□□ 1.49
HDAC4-212ENST00000495497 GRIPAP1Q4V328 841 aa24.35■■□□□ 1.49
HDAC4-212ENST00000495497 TAF7LQ5H9L4 462 aa24.35■■□□□ 1.49
HDAC4-212ENST00000495497 KLHDC4Q8TBB5 520 aa24.34■■□□□ 1.49
HDAC4-212ENST00000495497 C1orf115Q9H7X2 142 aa24.34■■□□□ 1.49
HDAC4-212ENST00000495497 WTIPA6NIX2 430 aaPredicted RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 GNAI2P04899 355 aa24.33■■□□□ 1.49
HDAC4-212ENST00000495497 IARSP41252 1262 aaKnown RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 RRP1P56182 461 aaKnown RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 MVPQ14764 893 aaKnown RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 GPR101Q96P66 508 aaPredicted RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 RTFDC1Q9BY42 306 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms