RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 MASTLQ96GX5 879 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 LTBP1Q14766 1721 aa13.92□□□□□ -0.18
KDM1A-205ENST00000494920 A0A1B0GUL6 1792 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 H0YIN7 160 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 NPHP1O15259 732 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 MS4A1P11836 297 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 NPR1P16066 1061 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
KDM1A-205ENST00000494920 SPEF2Q9C093 1822 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 FER1L6Q2WGJ9 1857 aa13.91□□□□□ -0.18
KDM1A-205ENST00000494920 ZBTB7BO15156 539 aaPredicted RBP13.9□□□□□ -0.18
KDM1A-205ENST00000494920 HSP90B1P14625 803 aaKnown RBP13.9□□□□□ -0.18
KDM1A-205ENST00000494920 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
KDM1A-205ENST00000494920 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.9□□□□□ -0.18
KDM1A-205ENST00000494920 C7orf43Q8WVR3 580 aa13.9□□□□□ -0.18
KDM1A-205ENST00000494920 CRAMP1Q96RY5 1269 aa13.9□□□□□ -0.18
KDM1A-205ENST00000494920 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
KDM1A-205ENST00000494920 GNAI3P08754 354 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 YBX3P16989 372 aaKnown RBP eCLIP13.88□□□□□ -0.194e-9■□□□□ 8.2
KDM1A-205ENST00000494920 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
KDM1A-205ENST00000494920 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 ITPRIPQ8IWB1 547 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 GREM2Q9H772 168 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 SEC31BQ9NQW1 1179 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 PIM2Q9P1W9 311 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 COG6Q9Y2V7 657 aa13.88□□□□□ -0.19
KDM1A-205ENST00000494920 UBTFL1P0CB47 393 aaPredicted RBP13.87□□□□□ -0.19
KDM1A-205ENST00000494920 MTX1Q13505 466 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 GRAPQ13588 217 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 LMBR1LQ6UX01 489 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
KDM1A-205ENST00000494920 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
KDM1A-205ENST00000494920 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
KDM1A-205ENST00000494920 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 ZBTB40Q9NUA8 1239 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 LRRFIP2Q9Y608 721 aaKnown RBP13.87□□□□□ -0.19
KDM1A-205ENST00000494920 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
KDM1A-205ENST00000494920 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
KDM1A-205ENST00000494920 DALRD3Q5D0E6 543 aaKnown RBP13.86□□□□□ -0.19
KDM1A-205ENST00000494920 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.19
KDM1A-205ENST00000494920 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
KDM1A-205ENST00000494920 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
KDM1A-205ENST00000494920 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
KDM1A-205ENST00000494920 SBF1O95248 1867 aa13.85□□□□□ -0.19
KDM1A-205ENST00000494920 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
KDM1A-205ENST00000494920 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
KDM1A-205ENST00000494920 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
KDM1A-205ENST00000494920 GNAI2P04899 355 aa13.84□□□□□ -0.19
KDM1A-205ENST00000494920 ITGA6P23229 1130 aa13.84□□□□□ -0.19
KDM1A-205ENST00000494920 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
KDM1A-205ENST00000494920 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
KDM1A-205ENST00000494920 BBOX1O75936 387 aa13.83□□□□□ -0.2
KDM1A-205ENST00000494920 RPS8P62241 208 aaKnown RBP13.83□□□□□ -0.2
KDM1A-205ENST00000494920 OLFM4Q6UX06 510 aa13.83□□□□□ -0.2
KDM1A-205ENST00000494920 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
KDM1A-205ENST00000494920 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
KDM1A-205ENST00000494920 ATP6V0A2Q9Y487 856 aa13.83□□□□□ -0.2
KDM1A-205ENST00000494920 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
KDM1A-205ENST00000494920 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
KDM1A-205ENST00000494920 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
KDM1A-205ENST00000494920 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
KDM1A-205ENST00000494920 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
KDM1A-205ENST00000494920 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
KDM1A-205ENST00000494920 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 NFKBIEO00221 500 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 C21orf2O43822 256 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
KDM1A-205ENST00000494920 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
KDM1A-205ENST00000494920 POLA2Q14181 598 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
KDM1A-205ENST00000494920 CHD4Q14839 1912 aa13.81□□□□□ -0.2
KDM1A-205ENST00000494920 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 PRELPP51888 382 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 CC2D2BQ6DHV5 1058 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
KDM1A-205ENST00000494920 COPRSQ9NQ92 184 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
KDM1A-205ENST00000494920 COL4A5P29400 1685 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 ATP8B2P98198 1209 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 CCDC57Q2TAC2 916 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 RIPOR2Q9Y4F9 1068 aa13.79□□□□□ -0.2
KDM1A-205ENST00000494920 SOGA3Q5TF21 947 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 ATG9AQ7Z3C6 839 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 PSMD1Q99460 953 aa13.78□□□□□ -0.2
KDM1A-205ENST00000494920 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
KDM1A-205ENST00000494920 PUS3Q9BZE2 481 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms