RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GYS1P13807 737 aa25.43■■□□□ 1.66
KPNA1-210ENST00000494339 ZNF594Q96JF6 807 aaPredicted RBP25.43■■□□□ 1.66
KPNA1-210ENST00000494339 ERFEQ4G0M1 354 aa25.43■■□□□ 1.66
KPNA1-210ENST00000494339 DEFB132Q7Z7B7 95 aa25.43■■□□□ 1.66
KPNA1-210ENST00000494339 NBPF5PQ86XG9 351 aaPredicted RBP25.43■■□□□ 1.66
KPNA1-210ENST00000494339 GREM2Q9H772 168 aa25.43■■□□□ 1.66
KPNA1-210ENST00000494339 SASH1O94885 1247 aa25.42■■□□□ 1.66
KPNA1-210ENST00000494339 GTF2E1P29083 439 aaPredicted RBP25.42■■□□□ 1.66
KPNA1-210ENST00000494339 BAG6P46379 1132 aa25.42■■□□□ 1.66
KPNA1-210ENST00000494339 IFIT5Q13325 482 aaKnown RBP25.42■■□□□ 1.66
KPNA1-210ENST00000494339 NFIXQ14938 502 aa25.42■■□□□ 1.66
KPNA1-210ENST00000494339 LAMB2P55268 1798 aa25.42■■□□□ 1.66
KPNA1-210ENST00000494339 BACH2Q9BYV9 841 aa25.41■■□□□ 1.66
KPNA1-210ENST00000494339 MSH5O43196 834 aa25.41■■□□□ 1.66
KPNA1-210ENST00000494339 COL23A1Q86Y22 540 aaPredicted RBP25.41■■□□□ 1.66
KPNA1-210ENST00000494339 NYXQ9GZU5 481 aa25.41■■□□□ 1.66
KPNA1-210ENST00000494339 ITGA6P23229 1130 aa25.4■■□□□ 1.66
KPNA1-210ENST00000494339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.4■■□□□ 1.66
KPNA1-210ENST00000494339 HSP90B1P14625 803 aaKnown RBP25.39■■□□□ 1.66
KPNA1-210ENST00000494339 CARMIL3Q8ND23 1372 aa25.39■■□□□ 1.66
KPNA1-210ENST00000494339 TAF7LQ5H9L4 462 aa25.39■■□□□ 1.65
KPNA1-210ENST00000494339 CLASRPQ8N2M8 674 aaKnown RBP25.39■■□□□ 1.65
KPNA1-210ENST00000494339 ANO8Q9HCE9 1232 aaPredicted RBP25.39■■□□□ 1.65
KPNA1-210ENST00000494339 ABCC12Q96J65 1359 aa25.38■■□□□ 1.65
KPNA1-210ENST00000494339 TPTE2Q6XPS3 522 aa25.38■■□□□ 1.65
KPNA1-210ENST00000494339 ANKRD18BA2A2Z9 1011 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 CCDC24Q8N4L8 307 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 NPHP1O15259 732 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 MX1P20591 662 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 PDE1AP54750 535 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 LRRC24Q50LG9 513 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 TSHZ3Q63HK5 1081 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 FLAD1Q8NFF5 587 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 PUS3Q9BZE2 481 aaKnown RBP25.37■■□□□ 1.65
KPNA1-210ENST00000494339 PNPLA7Q6ZV29 1317 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 SALL3Q9BXA9 1300 aa25.37■■□□□ 1.65
KPNA1-210ENST00000494339 EYA2O00167 538 aa25.36■■□□□ 1.65
KPNA1-210ENST00000494339 ATG9AQ7Z3C6 839 aa25.36■■□□□ 1.65
KPNA1-210ENST00000494339 TFCP2Q12800 502 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 C8orf34Q49A92 452 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 CCDC152Q4G0S7 254 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 C3orf67Q6ZVT6 689 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 AACSQ86V21 672 aa25.35■■□□□ 1.65
KPNA1-210ENST00000494339 SLC15A2Q16348 729 aa25.34■■□□□ 1.65
KPNA1-210ENST00000494339 BMP2KLQ5H9B9 411 aa25.34■■□□□ 1.65
KPNA1-210ENST00000494339 SLC10A5Q5PT55 438 aa25.34■■□□□ 1.65
KPNA1-210ENST00000494339 UPF1Q92900 1129 aaKnown RBP eCLIP25.34■■□□□ 1.65
KPNA1-210ENST00000494339 STK32BQ9NY57 414 aa25.34■■□□□ 1.65
KPNA1-210ENST00000494339 CIAO1O76071 339 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 TM4SF1P30408 202 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 IL15P40933 162 aaPredicted RBP25.33■■□□□ 1.65
KPNA1-210ENST00000494339 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 EAF2Q96CJ1 260 aaPredicted RBP25.33■■□□□ 1.65
KPNA1-210ENST00000494339 GSPT1P15170 499 aaKnown RBP25.33■■□□□ 1.65
KPNA1-210ENST00000494339 CNBD1Q8NA66 436 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 OSBPL3Q9H4L5 887 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 SEC31BQ9NQW1 1179 aa25.33■■□□□ 1.65
KPNA1-210ENST00000494339 IFIT2P09913 472 aaKnown RBP25.32■■□□□ 1.64
KPNA1-210ENST00000494339 LDHAL6AQ6ZMR3 332 aa25.31■■□□□ 1.64
KPNA1-210ENST00000494339 CCDC8Q9H0W5 538 aaPredicted RBP25.31■■□□□ 1.64
KPNA1-210ENST00000494339 STAP2Q9UGK3 403 aa25.31■■□□□ 1.64
KPNA1-210ENST00000494339 FBXO3Q9UK99 471 aa25.31■■□□□ 1.64
KPNA1-210ENST00000494339 SERPINB2P05120 415 aa25.3■■□□□ 1.64
KPNA1-210ENST00000494339 DDR1Q08345 913 aa25.3■■□□□ 1.64
KPNA1-210ENST00000494339 NLRP3Q96P20 1036 aa25.3■■□□□ 1.64
KPNA1-210ENST00000494339 SF3B3Q15393 1217 aaKnown RBP25.29■■□□□ 1.64
KPNA1-210ENST00000494339 TNNI3KQ59H18 835 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 PRR5LQ6MZQ0 368 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 NLGN1Q8N2Q7 840 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 CNNM1Q9NRU3 951 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 FPGT-TNNI3KV9GXZ4 949 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 RTL9Q8NET4 1388 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 CCDC125Q86Z20 511 aa25.29■■□□□ 1.64
KPNA1-210ENST00000494339 TLR7Q9NYK1 1049 aaKnown RBP25.29■■□□□ 1.64
KPNA1-210ENST00000494339 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
KPNA1-210ENST00000494339 TAF1P21675 1872 aa25.28■■□□□ 1.64
KPNA1-210ENST00000494339 SPEF2Q9C093 1822 aa25.28■■□□□ 1.64
KPNA1-210ENST00000494339 MSL1Q68DK7 614 aa25.27■■□□□ 1.64
KPNA1-210ENST00000494339 CEP126Q9P2H0 1117 aa25.27■■□□□ 1.64
KPNA1-210ENST00000494339 RIPOR2Q9Y4F9 1068 aa25.27■■□□□ 1.64
KPNA1-210ENST00000494339 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
KPNA1-210ENST00000494339 LRP5O75197 1615 aa25.26■■□□□ 1.63
KPNA1-210ENST00000494339 MPHOSPH8Q99549 860 aa25.26■■□□□ 1.63
KPNA1-210ENST00000494339 COL4A1P02462 1669 aa25.26■■□□□ 1.63
KPNA1-210ENST00000494339 AOX1Q06278 1338 aa25.26■■□□□ 1.63
KPNA1-210ENST00000494339 METTL24Q5JXM2 366 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 PI4K2BQ8TCG2 481 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 QSER1Q2KHR3 1735 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 IGHMBP2P38935 993 aaKnown RBP25.25■■□□□ 1.63
KPNA1-210ENST00000494339 ST5P78524 1137 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 GPATCH3Q96I76 525 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 ECHDC1Q9NTX5 307 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 TTC41PQ6P2S7 1318 aa25.25■■□□□ 1.63
KPNA1-210ENST00000494339 SDSP20132 328 aa25.24■■□□□ 1.63
KPNA1-210ENST00000494339 CDC5LQ99459 802 aaKnown RBP25.24■■□□□ 1.63
KPNA1-210ENST00000494339 DBNLQ9UJU6 430 aaKnown RBP25.24■■□□□ 1.63
KPNA1-210ENST00000494339 NEUROD6Q96NK8 337 aa25.24■■□□□ 1.63
KPNA1-210ENST00000494339 GPR108Q9NPR9 543 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms