RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
EPHA3-203ENST00000494014 ERO1AQ96HE7 468 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 CHAMP1Q96JM3 812 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 NBPF4Q96M43 638 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 CD2APQ9Y5K6 639 aa8.39□□□□□ -1.07
EPHA3-203ENST00000494014 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 ERC2O15083 957 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 AMPHP49418 695 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 HNRNPH2P55795 449 aaKnown RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 TEX35Q5T0J7 233 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 TXLNBQ8N3L3 684 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 U2AF1L5P0DN76 240 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 MTHFSP49914 203 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 U2AF1Q01081 240 aaKnown RBP eCLIP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 C16orf45Q96MC5 204 aaPredicted RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 IGSF1Q8N6C5 1336 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 MCCP23508 829 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 ANAPC15P60006 121 aa8.38□□□□□ -1.07
EPHA3-203ENST00000494014 SECISBP2LQ93073 1101 aaKnown RBP8.38□□□□□ -1.07
EPHA3-203ENST00000494014 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 CCDC192P0DO97 292 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 POLD1P28340 1107 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 TMPOP42166 694 aaKnown RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 NEK4P51957 841 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 MAPK8IP2Q13387 824 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 PALLDQ8WX93 1383 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 PTGS1P23219 599 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 BRD2P25440 801 aaKnown RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 AXDND1Q5T1B0 1012 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 SPC24Q8NBT2 197 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 RAPGEF4Q8WZA2 1011 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 DCTPP1Q9H773 170 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.37□□□□□ -1.07
EPHA3-203ENST00000494014 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
EPHA3-203ENST00000494014 KIF2AO00139 706 aaPredicted RBP8.36□□□□□ -1.07
EPHA3-203ENST00000494014 TPD52L1Q16890 204 aaPredicted RBP8.36□□□□□ -1.07
EPHA3-203ENST00000494014 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 SIRT2Q8IXJ6 389 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 FAM200AQ8TCP9 573 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 BRMS1Q9HCU9 246 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 CLGNO14967 610 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 NEMFO60524 1076 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 TPM4P67936 248 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
EPHA3-203ENST00000494014 CWC15Q9P013 229 aaKnown RBP8.36□□□□□ -1.07
EPHA3-203ENST00000494014 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 KAT6BQ8WYB5 2073 aa8.36□□□□□ -1.07
EPHA3-203ENST00000494014 AP5Z1O43299 807 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 GRIN3BO60391 1043 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 ADRA2BP18089 450 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 SDSP20132 328 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 FBXO38Q6PIJ6 1188 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 ABCC4O15439 1325 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 RAD50Q92878 1312 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 CNTNAP4Q9C0A0 1308 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 ERVV-2B6SEH9 535 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
EPHA3-203ENST00000494014 CYP27B1O15528 508 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 SMARCA5O60264 1052 aaPredicted RBP8.35□□□□□ -1.07
EPHA3-203ENST00000494014 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 GPS2Q13227 327 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 CCDC186Q7Z3E2 898 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
EPHA3-203ENST00000494014 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
EPHA3-203ENST00000494014 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
EPHA3-203ENST00000494014 CCNL1Q9UK58 526 aaPredicted RBP8.35□□□□□ -1.07
EPHA3-203ENST00000494014 SLU7O95391 586 aaKnown RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 ZSCAN25Q6NSZ9 544 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 PLEKHF1Q96S99 279 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 ZNF215Q9UL58 517 aaPredicted RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 EPB41L2O43491 1005 aaKnown RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 CDC25BP30305 580 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 GTF2A1P52655 376 aaPredicted RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 SRCIN1Q9C0H9 1055 aa8.34□□□□□ -1.07
EPHA3-203ENST00000494014 V9GYY5 206 aaPredicted RBP8.34□□□□□ -1.07
EPHA3-203ENST00000494014 H2AFXP16104 143 aaPredicted RBP8.33□□□□□ -1.08
EPHA3-203ENST00000494014 CASQ1P31415 396 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 ICE2Q659A1 982 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 DRC7Q8IY82 874 aa8.33□□□□□ -1.08
EPHA3-203ENST00000494014 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms