RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	TOGARAM1	Q9Y4F4	1720 aa		10.1	□□□□□ -0.79
RBM39-238	ENST00000493853		A0A0G2JLW4	131 aa		10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	NR1I2	O75469	434 aa		10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	PUS10	Q3MIT2	529 aa	Known RBP	10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	DNAJC10	Q8IXB1	793 aa		10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	GAS2L2	Q8NHY3	880 aa		10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	ZC3H15	Q8WU90	426 aa	Known RBP	10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-238	ENST00000493853	ITGB4	P16144	1822 aa		10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	GNAT3	A8MTJ3	354 aa		10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	NPM2	Q86SE8	214 aa	Known RBP	10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	ZNF526	Q8TF50	670 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	SRP68	Q9UHB9	627 aa	Known RBP	10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	NPC1L1	Q9UHC9	1359 aa		10.08	□□□□□ -0.8
RBM39-238	ENST00000493853	TLL1	O43897	1013 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	STARD3NL	O95772	234 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	DPEP1	P16444	411 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	GCGR	P47871	477 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	INTS5	Q6P9B9	1019 aa	Known RBP	10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	ARHGAP27	Q6ZUM4	889 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	TUBGCP6	Q96RT7	1819 aa		10.07	□□□□□ -0.8
RBM39-238	ENST00000493853	ZMYND10	O75800	440 aa		10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	CYP19A1	P11511	503 aa	Predicted RBP	10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	CANX	P27824	592 aa	Known RBP	10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	SCUBE3	Q8IX30	993 aa		10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	PIM2	Q9P1W9	311 aa		10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	USP42	Q9H9J4	1324 aa	Known RBP	10.06	□□□□□ -0.8
RBM39-238	ENST00000493853	UTRN	P46939	3433 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	NEFM	P07197	916 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	PRKAR2B	P31323	418 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	FUT2	Q10981	343 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	USPL1	Q5W0Q7	1092 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	RTF1	Q92541	710 aa	Known RBP	10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	ATP10D	Q9P241	1426 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	TAF1L	Q8IZX4	1826 aa		10.05	□□□□□ -0.8
RBM39-238	ENST00000493853	COL24A1	Q17RW2	1714 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853		A0A087WZG4	1122 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	DALRD3	Q5D0E6	543 aa	Known RBP	10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	ZNF790	Q6PG37	636 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	IL17RE	Q8NFR9	667 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	NARF	Q9UHQ1	456 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	ZBTB1	Q9Y2K1	713 aa		10.04	□□□□□ -0.8
RBM39-238	ENST00000493853	BTBD11	A6QL63	1104 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	TM4SF1	P30408	202 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	CLCN1	P35523	988 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	BICDL1	Q6ZP65	573 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	UBR3	Q6ZT12	1888 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	ZNF496	Q96IT1	587 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	FMNL2	Q96PY5	1086 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	TMUB1	Q9BVT8	246 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	IRX2	Q9BZI1	471 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	GPCPD1	Q9NPB8	672 aa		10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	SOS1	Q07889	1333 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM39-238	ENST00000493853	POLRMT	O00411	1230 aa	Known RBP	10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	NPHP1	O15259	732 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	ADH1B	P00325	375 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	SERPINB2	P05120	415 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	CD46	P15529	392 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	PPP2R1A	P30153	589 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	DDR1	Q08345	913 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	GRIPAP1	Q4V328	841 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	MORN1	Q5T089	497 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	PHACTR3	Q96KR7	559 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	PRKD2	Q9BZL6	878 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	CIC	Q96RK0	1608 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	PXDNL	A1KZ92	1463 aa		10.02	□□□□□ -0.81
RBM39-238	ENST00000493853	COL15A1	P39059	1388 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	GOLGB1	Q14789	3259 aa	Known RBP	10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	C10orf71	Q711Q0	1435 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	KCNA3	P22001	575 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	CHRNA5	P30532	468 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	NFIX	Q14938	502 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	RSPH6A	Q9H0K4	717 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853	CHD4	Q14839	1912 aa		10.01	□□□□□ -0.81
RBM39-238	ENST00000493853		H0YIN7	160 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	S1PR4	O95977	384 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	C9orf131	Q5VYM1	1079 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	SPSB2	Q99619	263 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	TBC1D2B	Q9UPU7	963 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	HEG1	Q9ULI3	1381 aa		10	□□□□□ -0.81
RBM39-238	ENST00000493853	RNF223	E7ERA6	249 aa		9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	IL6ST	P40189	918 aa	Predicted RBP	9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	EIF5	P55010	431 aa	Known RBP	9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	SLC6A16	Q9GZN6	736 aa		9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	SLC27A5	Q9Y2P5	690 aa		9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	ZNF831	Q5JPB2	1677 aa		9.99	□□□□□ -0.81
RBM39-238	ENST00000493853	PPEF1	O14829	653 aa	Predicted RBP	9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	HTATSF1	O43719	755 aa	Known RBP	9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	KDM4A	O75164	1064 aa		9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	A1BG	P04217	495 aa		9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	SNRPA1	P09661	255 aa	Known RBP	9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	TTLL12	Q14166	644 aa	Predicted RBP	9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	MCM10	Q7L590	875 aa		9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	C2CD5	Q86YS7	1000 aa		9.98	□□□□□ -0.81
RBM39-238	ENST00000493853	TTLL6	Q8N841	843 aa		9.98	□□□□□ -0.81

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