RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
NFIA-213ENST00000493627 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 GRAPLQ8TC17 118 aaPredicted RBP11.85□□□□□ -0.51
NFIA-213ENST00000493627 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
NFIA-213ENST00000493627 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 DDX60Q8IY21 1712 aaKnown RBP11.84□□□□□ -0.51
NFIA-213ENST00000493627 APAF1O14727 1248 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 SP8Q8IXZ3 490 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 HYPKQ9NX55 129 aa11.84□□□□□ -0.51
NFIA-213ENST00000493627 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 EPS15P42566 896 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
NFIA-213ENST00000493627 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 MPNDQ8N594 471 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 ZNRF3Q9ULT6 936 aa11.83□□□□□ -0.52
NFIA-213ENST00000493627 GNAI1P63096 354 aa11.82□□□□□ -0.52
NFIA-213ENST00000493627 CXCL9Q07325 125 aa11.82□□□□□ -0.52
NFIA-213ENST00000493627 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
NFIA-213ENST00000493627 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
NFIA-213ENST00000493627 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
NFIA-213ENST00000493627 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
NFIA-213ENST00000493627 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
NFIA-213ENST00000493627 VEGFBP49765 207 aa11.81□□□□□ -0.52
NFIA-213ENST00000493627 GMPSP49915 693 aaPredicted RBP11.81□□□□□ -0.52
NFIA-213ENST00000493627 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
NFIA-213ENST00000493627 CELF1Q92879 486 aaKnown RBP11.81□□□□□ -0.52
NFIA-213ENST00000493627 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
NFIA-213ENST00000493627 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
NFIA-213ENST00000493627 COL4A1P02462 1669 aa11.81□□□□□ -0.52
NFIA-213ENST00000493627 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
NFIA-213ENST00000493627 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
NFIA-213ENST00000493627 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
NFIA-213ENST00000493627 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
NFIA-213ENST00000493627 CIAPIN1Q6FI81 312 aa11.8□□□□□ -0.52
NFIA-213ENST00000493627 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
NFIA-213ENST00000493627 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
NFIA-213ENST00000493627 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
NFIA-213ENST00000493627 FOXN1O15353 648 aa11.79□□□□□ -0.52
NFIA-213ENST00000493627 RAD17O75943 681 aa11.79□□□□□ -0.52
NFIA-213ENST00000493627 PHAXQ9H814 394 aaKnown RBP11.79□□□□□ -0.52
NFIA-213ENST00000493627 TAF1P21675 1872 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 YDJCA8MPS7 323 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 TRAF5O00463 557 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 CAPN15O75808 1086 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
NFIA-213ENST00000493627 TNIP1Q15025 636 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 DEFB115Q30KQ5 88 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
NFIA-213ENST00000493627 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 MYD88Q99836 296 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 BCL2L13Q9BXK5 485 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
NFIA-213ENST00000493627 THSD7BQ9C0I4 1608 aa11.78□□□□□ -0.52
NFIA-213ENST00000493627 GPSM2P81274 684 aa11.77□□□□□ -0.53
NFIA-213ENST00000493627 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
NFIA-213ENST00000493627 WDR33Q9C0J8 1336 aaKnown RBP11.77□□□□□ -0.53
NFIA-213ENST00000493627 C6orf229H3BNL8 230 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
NFIA-213ENST00000493627 HSP90B1P14625 803 aaKnown RBP11.76□□□□□ -0.53
NFIA-213ENST00000493627 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
NFIA-213ENST00000493627 CCDC184Q52MB2 194 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 CCDC30Q5VVM6 783 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
NFIA-213ENST00000493627 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 DBNDD1Q9H9R9 158 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 CWC25Q9NXE8 425 aaPredicted RBP11.76□□□□□ -0.53
NFIA-213ENST00000493627 POLLQ9UGP5 575 aa11.76□□□□□ -0.53
NFIA-213ENST00000493627 SHTN1A0MZ66 631 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 CST9Q5W186 159 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 TSR2Q969E8 191 aaKnown RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 GPR101Q96P66 508 aaPredicted RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 EYA3Q99504 573 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 METTL22Q9BUU2 404 aaPredicted RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 CHMP4AQ9BY43 222 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
NFIA-213ENST00000493627 CNOT7Q9UIV1 285 aaKnown RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
NFIA-213ENST00000493627 TLL2Q9Y6L7 1015 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms