RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 PPIP5K2O43314 1243 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 CELF1Q92879 486 aaKnown RBP13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 ISCA1Q9BUE6 129 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
SOX2-OT-215ENST00000493521 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 FOXN1O15353 648 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 CXCL9Q07325 125 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 JDP2Q8WYK2 163 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
SOX2-OT-215ENST00000493521 RAD17O75943 681 aa13.23□□□□□ -0.29
SOX2-OT-215ENST00000493521 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
SOX2-OT-215ENST00000493521 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 TMEM88BA6NKF7 163 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 EIF6P56537 245 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 NIM1KQ8IY84 436 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
SOX2-OT-215ENST00000493521 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 EGFRP00533 1210 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 GRAPQ13588 217 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 CST9Q5W186 159 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 TNS4Q8IZW8 715 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 GRAPLQ8TC17 118 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 TRPM4Q8TD43 1214 aa13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-215ENST00000493521 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 GPSM2P81274 684 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 DPP8Q6V1X1 898 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 MPNDQ8N594 471 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
SOX2-OT-215ENST00000493521 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 MYD88Q99836 296 aa13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
SOX2-OT-215ENST00000493521 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 BBOX1O75936 387 aa13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 G2E3Q7L622 706 aa13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 RTL9Q8NET4 1388 aa13.18□□□□□ -0.3
SOX2-OT-215ENST00000493521 TRPM7Q96QT4 1865 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 AOC2O75106 756 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 HOXB7P09629 217 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 GRM1Q13255 1194 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
SOX2-OT-215ENST00000493521 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 PSMD14O00487 310 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 DEFB115Q30KQ5 88 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 NSFL1CQ9UNZ2 370 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 SPEF2Q9C093 1822 aa13.16□□□□□ -0.3
SOX2-OT-215ENST00000493521 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 LBX1P52954 281 aa13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 WBP1LQ9NX94 342 aa13.15□□□□□ -0.3
SOX2-OT-215ENST00000493521 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 GNAI1P63096 354 aa13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 TRIM28Q13263 835 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-215ENST00000493521 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 ECE2O60344 883 aa13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
SOX2-OT-215ENST00000493521 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms