RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 KIF3CO14782 793 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 PDE8AO60658 829 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 TOMM70O94826 608 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 HNRNPUQ00839 825 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 SP8Q8IXZ3 490 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 PSMD1Q99460 953 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 BCL2L13Q9BXK5 485 aa9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 DDX60Q8IY21 1712 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-204ENST00000492511 ZC3H4Q9UPT8 1303 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 ALDH1L2Q3SY69 923 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 UBE3BQ7Z3V4 1068 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 RTFDC1Q9BY42 306 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 FER1L6Q2WGJ9 1857 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 WDR90Q96KV7 1748 aa9.16□□□□□ -0.94
PDLIM1-204ENST00000492511 LAMB2P55268 1798 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 GLTPD2A6NH11 291 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 POTECB2RU33 542 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 CSF1RP07333 972 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 CT47B1P0C2W7 299 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 IARSP41252 1262 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 CTSWP56202 376 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 RPS8P62241 208 aaKnown RBP9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 FOXO4P98177 505 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 GRIPAP1Q4V328 841 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 GREM2Q9H772 168 aa9.15□□□□□ -0.94
PDLIM1-204ENST00000492511 SBF1O95248 1867 aa9.15□□□□□ -0.95
PDLIM1-204ENST00000492511 COL4A5P29400 1685 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 PTPRCP08575 1304 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 FZD9O00144 591 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 ALDH1L1O75891 902 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 HSP90B1P14625 803 aaKnown RBP9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 EPHA10Q5JZY3 1008 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 RRAGCQ9HB90 399 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 SMC4Q9NTJ3 1288 aa9.14□□□□□ -0.95
PDLIM1-204ENST00000492511 ZNF541Q9H0D2 1346 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 GRM8O00222 908 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 DDNO94850 711 aaPredicted RBP9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 GPSM2P81274 684 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 DPP8Q6V1X1 898 aaPredicted RBP9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 TMC4Q7Z404 712 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 MPNDQ8N594 471 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 KAZALD1Q96I82 304 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 POLLQ9UGP5 575 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 NOB1Q9ULX3 412 aaKnown RBP9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 CACNA1SQ13698 1873 aa9.13□□□□□ -0.95
PDLIM1-204ENST00000492511 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 UTYO14607 1347 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 KDM2BQ8NHM5 1336 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 WTIPA6NIX2 430 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 BCAR3O75815 825 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 NBPF7P0C2Y1 421 aaPredicted RBP9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 AOC3Q16853 763 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 VPS33BQ9H267 617 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 PODXL2Q9NZ53 605 aa9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 NSFL1CQ9UNZ2 370 aaKnown RBP9.12□□□□□ -0.95
PDLIM1-204ENST00000492511 TAF1P21675 1872 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 PPIP5K2O43314 1243 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 ITGA6P23229 1130 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 FSTL1Q12841 308 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 DPY19L2Q6NUT2 758 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 ANKRD18AQ8IVF6 992 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 TBC1D16Q8TBP0 767 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 SUCLG2Q96I99 432 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 GPR101Q96P66 508 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 USP44Q9H0E7 712 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 MINPP1Q9UNW1 487 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 DUOX1Q9NRD9 1551 aa9.11□□□□□ -0.95
PDLIM1-204ENST00000492511 YDJCA8MPS7 323 aa9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 VEGFAP15692 232 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 LMBR1LQ6UX01 489 aa9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 JDP2Q8WYK2 163 aa9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 C9orf78Q9NZ63 289 aaPredicted RBP9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 TNNQ9UQP3 1299 aa9.1□□□□□ -0.95
PDLIM1-204ENST00000492511 LRRC37AA6NMS7 1700 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 C6orf229H3BNL8 230 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 CXCL9Q07325 125 aa9.09□□□□□ -0.95
PDLIM1-204ENST00000492511 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms