RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 ZNRF3Q9ULT6 936 aa10.74□□□□□ -0.69
APP-216ENST00000491395 HSPA1AP0DMV8 641 aaKnown RBP10.73□□□□□ -0.69
APP-216ENST00000491395 HSPA1BP0DMV9 641 aaKnown RBP10.73□□□□□ -0.69
APP-216ENST00000491395 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
APP-216ENST00000491395 CXCL9Q07325 125 aa10.73□□□□□ -0.69
APP-216ENST00000491395 SF3B3Q15393 1217 aaKnown RBP10.73□□□□□ -0.69
APP-216ENST00000491395 SUPT20HQ8NEM7 779 aa10.73□□□□□ -0.69
APP-216ENST00000491395 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
APP-216ENST00000491395 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
APP-216ENST00000491395 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
APP-216ENST00000491395 IRS4O14654 1257 aaPredicted RBP10.72□□□□□ -0.69
APP-216ENST00000491395 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
APP-216ENST00000491395 KIAA2012Q0VF49 1180 aa10.72□□□□□ -0.69
APP-216ENST00000491395 TSPYL6Q8N831 410 aa10.72□□□□□ -0.69
APP-216ENST00000491395 JARID2Q92833 1246 aaPredicted RBP10.72□□□□□ -0.69
APP-216ENST00000491395 MYD88Q99836 296 aa10.72□□□□□ -0.69
APP-216ENST00000491395 RAD17O75943 681 aa10.71□□□□□ -0.69
APP-216ENST00000491395 GMPSP49915 693 aaPredicted RBP10.71□□□□□ -0.69
APP-216ENST00000491395 FMR1Q06787 632 aaKnown RBP eCLIP10.71□□□□□ -0.69
APP-216ENST00000491395 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
APP-216ENST00000491395 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
APP-216ENST00000491395 GPRC5DQ9NZD1 345 aa10.71□□□□□ -0.69
APP-216ENST00000491395 CNTNAP1P78357 1384 aa10.7□□□□□ -0.7
APP-216ENST00000491395 VEGFBP49765 207 aa10.7□□□□□ -0.7
APP-216ENST00000491395 RPS8P62241 208 aaKnown RBP10.7□□□□□ -0.7
APP-216ENST00000491395 GPSM2P81274 684 aa10.7□□□□□ -0.7
APP-216ENST00000491395 CCDC30Q5VVM6 783 aa10.7□□□□□ -0.7
APP-216ENST00000491395 CIAPIN1Q6FI81 312 aa10.7□□□□□ -0.7
APP-216ENST00000491395 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
APP-216ENST00000491395 ZBTB38Q8NAP3 1195 aaPredicted RBP10.7□□□□□ -0.7
APP-216ENST00000491395 SEC31BQ9NQW1 1179 aa10.7□□□□□ -0.7
APP-216ENST00000491395 NSFL1CQ9UNZ2 370 aaKnown RBP10.7□□□□□ -0.7
APP-216ENST00000491395 YDJCA8MPS7 323 aa10.69□□□□□ -0.7
APP-216ENST00000491395 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
APP-216ENST00000491395 TRAF5O00463 557 aa10.69□□□□□ -0.7
APP-216ENST00000491395 RIMBP2O15034 1052 aa10.69□□□□□ -0.7
APP-216ENST00000491395 TNIP1Q15025 636 aa10.69□□□□□ -0.7
APP-216ENST00000491395 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
APP-216ENST00000491395 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
APP-216ENST00000491395 GPR101Q96P66 508 aaPredicted RBP10.69□□□□□ -0.7
APP-216ENST00000491395 METTL22Q9BUU2 404 aaPredicted RBP10.69□□□□□ -0.7
APP-216ENST00000491395 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
APP-216ENST00000491395 ADARB2Q9NS39 739 aaKnown RBP10.69□□□□□ -0.7
APP-216ENST00000491395 POLLQ9UGP5 575 aa10.69□□□□□ -0.7
APP-216ENST00000491395 SCN4AP35499 1836 aa10.69□□□□□ -0.7
APP-216ENST00000491395 SHTN1A0MZ66 631 aa10.68□□□□□ -0.7
APP-216ENST00000491395 DDX58O95786 925 aaKnown RBP10.68□□□□□ -0.7
APP-216ENST00000491395 PCCAP05165 728 aaPredicted RBP10.68□□□□□ -0.7
APP-216ENST00000491395 ZEB1P37275 1124 aaPredicted RBP10.68□□□□□ -0.7
APP-216ENST00000491395 HIRAP54198 1017 aaPredicted RBP10.68□□□□□ -0.7
APP-216ENST00000491395 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
APP-216ENST00000491395 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
APP-216ENST00000491395 CCDC85AQ96PX6 553 aaPredicted RBP10.68□□□□□ -0.7
APP-216ENST00000491395 CHMP4AQ9BY43 222 aa10.68□□□□□ -0.7
APP-216ENST00000491395 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
APP-216ENST00000491395 CWC25Q9NXE8 425 aaPredicted RBP10.68□□□□□ -0.7
APP-216ENST00000491395 ABT1Q9ULW3 272 aaKnown RBP10.68□□□□□ -0.7
APP-216ENST00000491395 MAP3K2Q9Y2U5 619 aa10.68□□□□□ -0.7
APP-216ENST00000491395 PI4KAP2A4QPH2 592 aa10.67□□□□□ -0.7
APP-216ENST00000491395 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
APP-216ENST00000491395 RASSF10A6NK89 507 aa10.67□□□□□ -0.7
APP-216ENST00000491395 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
APP-216ENST00000491395 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
APP-216ENST00000491395 DEFB115Q30KQ5 88 aa10.67□□□□□ -0.7
APP-216ENST00000491395 KSR2Q6VAB6 950 aa10.67□□□□□ -0.7
APP-216ENST00000491395 G2E3Q7L622 706 aa10.67□□□□□ -0.7
APP-216ENST00000491395 TNS4Q8IZW8 715 aa10.67□□□□□ -0.7
APP-216ENST00000491395 PI4KAP1Q8N8J0 262 aa10.67□□□□□ -0.7
APP-216ENST00000491395 TBC1D16Q8TBP0 767 aa10.67□□□□□ -0.7
APP-216ENST00000491395 DBNDD1Q9H9R9 158 aa10.67□□□□□ -0.7
APP-216ENST00000491395 KCNQ5Q9NR82 932 aa10.67□□□□□ -0.7
APP-216ENST00000491395 CNOT7Q9UIV1 285 aaKnown RBP10.67□□□□□ -0.7
APP-216ENST00000491395 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
APP-216ENST00000491395 SALL2Q9Y467 1007 aaPredicted RBP10.67□□□□□ -0.7
APP-216ENST00000491395 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
APP-216ENST00000491395 PSMD14O00487 310 aa10.66□□□□□ -0.7
APP-216ENST00000491395 FOXN1O15353 648 aa10.66□□□□□ -0.7
APP-216ENST00000491395 ANP32CO43423 234 aa10.66□□□□□ -0.7
APP-216ENST00000491395 PDE8AO60658 829 aa10.66□□□□□ -0.7
APP-216ENST00000491395 SLC4A2P04920 1241 aa10.66□□□□□ -0.7
APP-216ENST00000491395 HSP90B1P14625 803 aaKnown RBP10.66□□□□□ -0.7
APP-216ENST00000491395 TWISTNBQ3B726 338 aaPredicted RBP10.66□□□□□ -0.7
APP-216ENST00000491395 CCDC152Q4G0S7 254 aa10.66□□□□□ -0.7
APP-216ENST00000491395 CST9Q5W186 159 aa10.66□□□□□ -0.7
APP-216ENST00000491395 TRPM4Q8TD43 1214 aa10.66□□□□□ -0.7
APP-216ENST00000491395 STK31Q9BXU1 1019 aa10.66□□□□□ -0.7
APP-216ENST00000491395 GLIS2Q9BZE0 524 aaPredicted RBP10.66□□□□□ -0.7
APP-216ENST00000491395 PGAP2Q9UHJ9 254 aa10.66□□□□□ -0.7
APP-216ENST00000491395 ADAMTSL1Q8N6G6 1762 aa10.66□□□□□ -0.7
APP-216ENST00000491395 IL16Q14005 1332 aa10.65□□□□□ -0.7
APP-216ENST00000491395 H7C1D1 291 aa10.65□□□□□ -0.7
APP-216ENST00000491395 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
APP-216ENST00000491395 EYA3Q99504 573 aa10.65□□□□□ -0.7
APP-216ENST00000491395 PODXL2Q9NZ53 605 aa10.65□□□□□ -0.7
APP-216ENST00000491395 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
APP-216ENST00000491395 COL4A1P02462 1669 aa10.65□□□□□ -0.7
APP-216ENST00000491395 DUOX1Q9NRD9 1551 aa10.65□□□□□ -0.71
APP-216ENST00000491395 CDHR2Q9BYE9 1310 aa10.64□□□□□ -0.71
APP-216ENST00000491395 WDR33Q9C0J8 1336 aaKnown RBP10.64□□□□□ -0.71
APP-216ENST00000491395 ECE2O60344 883 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms