RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CHMP4AQ9BY43 222 aa25.52■■□□□ 1.68
SREBF1-216ENST00000490796 ZNF853P0CG23 659 aa25.51■■□□□ 1.67
SREBF1-216ENST00000490796 COL13A1Q5TAT6 717 aaPredicted RBP25.51■■□□□ 1.67
SREBF1-216ENST00000490796 RTFDC1Q9BY42 306 aaPredicted RBP25.51■■□□□ 1.67
SREBF1-216ENST00000490796 ZNRF3Q9ULT6 936 aa25.51■■□□□ 1.67
SREBF1-216ENST00000490796 COL4A5P29400 1685 aa25.51■■□□□ 1.67
SREBF1-216ENST00000490796 EPS15P42566 896 aa25.5■■□□□ 1.67
SREBF1-216ENST00000490796 CNTNAP1P78357 1384 aa25.49■■□□□ 1.67
SREBF1-216ENST00000490796 SCNN1DP51172 638 aa25.49■■□□□ 1.67
SREBF1-216ENST00000490796 RTL5Q5HYW3 569 aaPredicted RBP25.49■■□□□ 1.67
SREBF1-216ENST00000490796 USP50Q70EL3 339 aaPredicted RBP25.49■■□□□ 1.67
SREBF1-216ENST00000490796 HSP90B1P14625 803 aaKnown RBP25.48■■□□□ 1.67
SREBF1-216ENST00000490796 LAMB2P55268 1798 aa25.47■■□□□ 1.67
SREBF1-216ENST00000490796 KIAA2012Q0VF49 1180 aa25.47■■□□□ 1.67
SREBF1-216ENST00000490796 TRIM28Q13263 835 aaKnown RBP25.47■■□□□ 1.67
SREBF1-216ENST00000490796 CIAPIN1Q6FI81 312 aa25.47■■□□□ 1.67
SREBF1-216ENST00000490796 BCL2L13Q9BXK5 485 aa25.47■■□□□ 1.67
SREBF1-216ENST00000490796 IRS4O14654 1257 aaPredicted RBP25.46■■□□□ 1.67
SREBF1-216ENST00000490796 CXCL9Q07325 125 aa25.46■■□□□ 1.67
SREBF1-216ENST00000490796 TNIP1Q15025 636 aa25.46■■□□□ 1.67
SREBF1-216ENST00000490796 SF3B3Q15393 1217 aaKnown RBP25.46■■□□□ 1.67
SREBF1-216ENST00000490796 TNS4Q8IZW8 715 aa25.46■■□□□ 1.67
SREBF1-216ENST00000490796 DDX58O95786 925 aaKnown RBP25.45■■□□□ 1.66
SREBF1-216ENST00000490796 CCDC30Q5VVM6 783 aa25.45■■□□□ 1.66
SREBF1-216ENST00000490796 PHAXQ9H814 394 aaKnown RBP25.45■■□□□ 1.66
SREBF1-216ENST00000490796 ADARB2Q9NS39 739 aaKnown RBP25.45■■□□□ 1.66
SREBF1-216ENST00000490796 ABT1Q9ULW3 272 aaKnown RBP25.45■■□□□ 1.66
SREBF1-216ENST00000490796 NSFL1CQ9UNZ2 370 aaKnown RBP25.45■■□□□ 1.66
SREBF1-216ENST00000490796 ADAMTSL1Q8N6G6 1762 aa25.44■■□□□ 1.66
SREBF1-216ENST00000490796 MYD88Q99836 296 aa25.44■■□□□ 1.66
SREBF1-216ENST00000490796 GPRC5DQ9NZD1 345 aa25.44■■□□□ 1.66
SREBF1-216ENST00000490796 RAD17O75943 681 aa25.43■■□□□ 1.66
SREBF1-216ENST00000490796 VEGFBP49765 207 aa25.43■■□□□ 1.66
SREBF1-216ENST00000490796 GMPSP49915 693 aaPredicted RBP25.43■■□□□ 1.66
SREBF1-216ENST00000490796 C8orf58Q8NAV2 365 aa25.43■■□□□ 1.66
SREBF1-216ENST00000490796 CELF1Q92879 486 aaKnown RBP25.43■■□□□ 1.66
SREBF1-216ENST00000490796 AIDAQ96BJ3 306 aa25.43■■□□□ 1.66
SREBF1-216ENST00000490796 C6orf229H3BNL8 230 aa25.42■■□□□ 1.66
SREBF1-216ENST00000490796 DEFB115Q30KQ5 88 aa25.42■■□□□ 1.66
SREBF1-216ENST00000490796 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
SREBF1-216ENST00000490796 WASHC4Q2M389 1173 aa25.41■■□□□ 1.66
SREBF1-216ENST00000490796 LTBP1Q14766 1721 aa25.4■■□□□ 1.66
SREBF1-216ENST00000490796 CCDC191Q8NCU4 936 aa25.4■■□□□ 1.66
SREBF1-216ENST00000490796 CWC25Q9NXE8 425 aaPredicted RBP25.4■■□□□ 1.66
SREBF1-216ENST00000490796 CDHR2Q9BYE9 1310 aa25.39■■□□□ 1.66
SREBF1-216ENST00000490796 TAF1P21675 1872 aa25.39■■□□□ 1.66
SREBF1-216ENST00000490796 RIMBP2O15034 1052 aa25.39■■□□□ 1.66
SREBF1-216ENST00000490796 RPS8P62241 208 aaKnown RBP25.39■■□□□ 1.66
SREBF1-216ENST00000490796 PAXIP1Q6ZW49 1069 aaPredicted RBP25.39■■□□□ 1.66
SREBF1-216ENST00000490796 EYA3Q99504 573 aa25.39■■□□□ 1.66
SREBF1-216ENST00000490796 STK31Q9BXU1 1019 aa25.39■■□□□ 1.66
SREBF1-216ENST00000490796 DDX60Q8IY21 1712 aaKnown RBP25.39■■□□□ 1.65
SREBF1-216ENST00000490796 RASSF10A6NK89 507 aa25.38■■□□□ 1.65
SREBF1-216ENST00000490796 ZEB1P37275 1124 aaPredicted RBP25.38■■□□□ 1.65
SREBF1-216ENST00000490796 H7C1D1 291 aa25.37■■□□□ 1.65
SREBF1-216ENST00000490796 PCCAP05165 728 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-216ENST00000490796 GPSM2P81274 684 aa25.37■■□□□ 1.65
SREBF1-216ENST00000490796 CCDC152Q4G0S7 254 aa25.37■■□□□ 1.65
SREBF1-216ENST00000490796 METTL22Q9BUU2 404 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-216ENST00000490796 G3V3G9 751 aa25.36■■□□□ 1.65
SREBF1-216ENST00000490796 CAPN15O75808 1086 aa25.36■■□□□ 1.65
SREBF1-216ENST00000490796 DCAF8Q5TAQ9 597 aa25.36■■□□□ 1.65
SREBF1-216ENST00000490796 TSR2Q969E8 191 aaKnown RBP25.36■■□□□ 1.65
SREBF1-216ENST00000490796 DBNDD1Q9H9R9 158 aa25.36■■□□□ 1.65
SREBF1-216ENST00000490796 TRAF5O00463 557 aa25.35■■□□□ 1.65
SREBF1-216ENST00000490796 CCDC184Q52MB2 194 aa25.35■■□□□ 1.65
SREBF1-216ENST00000490796 ANKIB1Q9P2G1 1089 aa25.35■■□□□ 1.65
SREBF1-216ENST00000490796 CNOT7Q9UIV1 285 aaKnown RBP25.35■■□□□ 1.65
SREBF1-216ENST00000490796 MAP3K2Q9Y2U5 619 aa25.35■■□□□ 1.65
SREBF1-216ENST00000490796 YDJCA8MPS7 323 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 FOXN1O15353 648 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 PDE8AO60658 829 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
SREBF1-216ENST00000490796 NEXNQ0ZGT2 675 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 CCDC27Q2M243 656 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 TSPYL6Q8N831 410 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 ZC3H12CQ9C0D7 883 aaKnown RBP25.34■■□□□ 1.65
SREBF1-216ENST00000490796 POLLQ9UGP5 575 aa25.34■■□□□ 1.65
SREBF1-216ENST00000490796 WDR33Q9C0J8 1336 aaKnown RBP25.34■■□□□ 1.65
SREBF1-216ENST00000490796 ECE1P42892 770 aa25.33■■□□□ 1.65
SREBF1-216ENST00000490796 CTCFP49711 727 aaPredicted RBP25.33■■□□□ 1.65
SREBF1-216ENST00000490796 GRM1Q13255 1194 aa25.33■■□□□ 1.65
SREBF1-216ENST00000490796 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
SREBF1-216ENST00000490796 ZC3H15Q8WU90 426 aaKnown RBP25.33■■□□□ 1.65
SREBF1-216ENST00000490796 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
SREBF1-216ENST00000490796 CCDC85AQ96PX6 553 aaPredicted RBP25.33■■□□□ 1.65
SREBF1-216ENST00000490796 MRS2Q9HD23 443 aa25.33■■□□□ 1.65
SREBF1-216ENST00000490796 SEC31BQ9NQW1 1179 aa25.33■■□□□ 1.65
SREBF1-216ENST00000490796 LRRC37AA6NMS7 1700 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 ANP32CO43423 234 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 DOK7Q18PE1 504 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 KSR2Q6VAB6 950 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 MICALL2Q8IY33 904 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 TBC1D16Q8TBP0 767 aa25.32■■□□□ 1.64
SREBF1-216ENST00000490796 DUOX1Q9NRD9 1551 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 PI4KAP2A4QPH2 592 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 PSMD14O00487 310 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 ECE2O60344 883 aa25.31■■□□□ 1.64
SREBF1-216ENST00000490796 MAP2K1Q02750 393 aaPredicted RBP25.31■■□□□ 1.64
SREBF1-216ENST00000490796 TWISTNBQ3B726 338 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms