RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 SOGA3Q5TF21 947 aa19.78■□□□□ 0.76
PTK7-217ENST00000490710 INTS3Q68E01 1043 aaKnown RBP19.78■□□□□ 0.76
PTK7-217ENST00000490710 ARHGAP27Q6ZUM4 889 aa19.78■□□□□ 0.76
PTK7-217ENST00000490710 ABCC4O15439 1325 aa19.77■□□□□ 0.76
PTK7-217ENST00000490710 TTLL11Q8NHH1 800 aa19.77■□□□□ 0.76
PTK7-217ENST00000490710 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
PTK7-217ENST00000490710 USP44Q9H0E7 712 aa19.77■□□□□ 0.76
PTK7-217ENST00000490710 CHD4Q14839 1912 aa19.76■□□□□ 0.75
PTK7-217ENST00000490710 TAF1P21675 1872 aa19.76■□□□□ 0.75
PTK7-217ENST00000490710 NBPF7P0C2Y1 421 aaPredicted RBP19.76■□□□□ 0.75
PTK7-217ENST00000490710 GRAPQ13588 217 aa19.76■□□□□ 0.75
PTK7-217ENST00000490710 GRAPLQ8TC17 118 aaPredicted RBP19.76■□□□□ 0.75
PTK7-217ENST00000490710 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
PTK7-217ENST00000490710 CSF1RP07333 972 aa19.75■□□□□ 0.75
PTK7-217ENST00000490710 CC2D2BQ6DHV5 1058 aa19.75■□□□□ 0.75
PTK7-217ENST00000490710 CLUAP1Q96AJ1 413 aa19.75■□□□□ 0.75
PTK7-217ENST00000490710 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
PTK7-217ENST00000490710 FOXO4P98177 505 aa19.74■□□□□ 0.75
PTK7-217ENST00000490710 TMC4Q7Z404 712 aa19.74■□□□□ 0.75
PTK7-217ENST00000490710 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
PTK7-217ENST00000490710 TNNQ9UQP3 1299 aa19.74■□□□□ 0.75
PTK7-217ENST00000490710 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 RTL9Q8NET4 1388 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 MS4A1P11836 297 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
PTK7-217ENST00000490710 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 CCDC93Q567U6 631 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 DZIP1LQ8IYY4 767 aaKnown RBP19.73■□□□□ 0.75
PTK7-217ENST00000490710 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
PTK7-217ENST00000490710 SEC31BQ9NQW1 1179 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 HDAC5Q9UQL6 1122 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 ATP6V0A2Q9Y487 856 aa19.73■□□□□ 0.75
PTK7-217ENST00000490710 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
PTK7-217ENST00000490710 RTKN2Q8IZC4 609 aa19.72■□□□□ 0.75
PTK7-217ENST00000490710 CELF1Q92879 486 aaKnown RBP19.72■□□□□ 0.75
PTK7-217ENST00000490710 SUCLG2Q96I99 432 aa19.72■□□□□ 0.75
PTK7-217ENST00000490710 EPHA10Q5JZY3 1008 aa19.71■□□□□ 0.75
PTK7-217ENST00000490710 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
PTK7-217ENST00000490710 CDC5LQ99459 802 aaKnown RBP19.71■□□□□ 0.75
PTK7-217ENST00000490710 GREM2Q9H772 168 aa19.71■□□□□ 0.75
PTK7-217ENST00000490710 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
PTK7-217ENST00000490710 LMBR1LQ6UX01 489 aa19.7■□□□□ 0.74
PTK7-217ENST00000490710 ANKRD18AQ8IVF6 992 aa19.7■□□□□ 0.74
PTK7-217ENST00000490710 TMEM57Q8N5G2 664 aa19.7■□□□□ 0.74
PTK7-217ENST00000490710 KAZALD1Q96I82 304 aa19.7■□□□□ 0.74
PTK7-217ENST00000490710 SBF1O95248 1867 aa19.7■□□□□ 0.74
PTK7-217ENST00000490710 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
PTK7-217ENST00000490710 GNAI3P08754 354 aa19.69■□□□□ 0.74
PTK7-217ENST00000490710 ITGA6P23229 1130 aa19.69■□□□□ 0.74
PTK7-217ENST00000490710 OLFM4Q6UX06 510 aa19.69■□□□□ 0.74
PTK7-217ENST00000490710 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
PTK7-217ENST00000490710 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
PTK7-217ENST00000490710 NFKBIEO00221 500 aa19.68■□□□□ 0.74
PTK7-217ENST00000490710 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
PTK7-217ENST00000490710 RABL6Q3YEC7 729 aaPredicted RBP19.68■□□□□ 0.74
PTK7-217ENST00000490710 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
PTK7-217ENST00000490710 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
PTK7-217ENST00000490710 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTK7-217ENST00000490710 CCDC57Q2TAC2 916 aa19.67■□□□□ 0.74
PTK7-217ENST00000490710 FAM161AQ3B820 660 aa19.67■□□□□ 0.74
PTK7-217ENST00000490710 MEIS3Q99687 375 aa19.67■□□□□ 0.74
PTK7-217ENST00000490710 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
PTK7-217ENST00000490710 GOLGB1Q14789 3259 aaKnown RBP19.67■□□□□ 0.74
PTK7-217ENST00000490710 COL4A1P02462 1669 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 LRRC37AA6NMS7 1700 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 PLIN1O60240 522 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 RLBP1P12271 317 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 LMNB1P20700 586 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 IGHMBP2P38935 993 aaKnown RBP19.66■□□□□ 0.74
PTK7-217ENST00000490710 RASSF7Q02833 373 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 MPNDQ8N594 471 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 PSMD1Q99460 953 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 BSDC1Q9NW68 430 aaPredicted RBP19.66■□□□□ 0.74
PTK7-217ENST00000490710 SNED1Q8TER0 1413 aa19.66■□□□□ 0.74
PTK7-217ENST00000490710 SPEF2Q9C093 1822 aa19.65■□□□□ 0.74
PTK7-217ENST00000490710 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
PTK7-217ENST00000490710 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
PTK7-217ENST00000490710 PANK1Q8TE04 598 aa19.65■□□□□ 0.74
PTK7-217ENST00000490710 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
PTK7-217ENST00000490710 DPP8Q6V1X1 898 aaPredicted RBP19.64■□□□□ 0.73
PTK7-217ENST00000490710 SUPT20HQ8NEM7 779 aa19.64■□□□□ 0.73
PTK7-217ENST00000490710 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
PTK7-217ENST00000490710 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
PTK7-217ENST00000490710 ZBTB7BO15156 539 aaPredicted RBP19.63■□□□□ 0.73
PTK7-217ENST00000490710 C9orf131Q5VYM1 1079 aa19.63■□□□□ 0.73
PTK7-217ENST00000490710 RTFDC1Q9BY42 306 aaPredicted RBP19.63■□□□□ 0.73
PTK7-217ENST00000490710 RNF181Q9P0P0 153 aa19.63■□□□□ 0.73
PTK7-217ENST00000490710 NSFL1CQ9UNZ2 370 aaKnown RBP19.63■□□□□ 0.73
PTK7-217ENST00000490710 LRRFIP2Q9Y608 721 aaKnown RBP19.63■□□□□ 0.73
PTK7-217ENST00000490710 GNAI2P04899 355 aa19.62■□□□□ 0.73
PTK7-217ENST00000490710 PRELPP51888 382 aa19.62■□□□□ 0.73
PTK7-217ENST00000490710 TAF7LQ5H9L4 462 aa19.62■□□□□ 0.73
PTK7-217ENST00000490710 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
PTK7-217ENST00000490710 VPS33BQ9H267 617 aa19.62■□□□□ 0.73
PTK7-217ENST00000490710 YY1P25490 414 aa19.61■□□□□ 0.73
PTK7-217ENST00000490710 GPSM2P81274 684 aa19.61■□□□□ 0.73
PTK7-217ENST00000490710 ZNF277Q9NRM2 450 aaPredicted RBP19.61■□□□□ 0.73
PTK7-217ENST00000490710 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
PTK7-217ENST00000490710 MINPP1Q9UNW1 487 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms