RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 PRKRIP1Q9H875 184 aaPredicted RBP20.39■□□□□ 0.85
NUP58-213ENST00000490231 HYPKQ9NX55 129 aa20.39■□□□□ 0.85
NUP58-213ENST00000490231 CXCL9Q07325 125 aa20.38■□□□□ 0.85
NUP58-213ENST00000490231 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
NUP58-213ENST00000490231 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
NUP58-213ENST00000490231 LAMB2P55268 1798 aa20.37■□□□□ 0.85
NUP58-213ENST00000490231 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
NUP58-213ENST00000490231 DEFB115Q30KQ5 88 aa20.37■□□□□ 0.85
NUP58-213ENST00000490231 ADARB2Q9NS39 739 aaKnown RBP20.37■□□□□ 0.85
NUP58-213ENST00000490231 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
NUP58-213ENST00000490231 FOXN1O15353 648 aa20.36■□□□□ 0.85
NUP58-213ENST00000490231 TRIM28Q13263 835 aaKnown RBP20.36■□□□□ 0.85
NUP58-213ENST00000490231 SF3B3Q15393 1217 aaKnown RBP20.36■□□□□ 0.85
NUP58-213ENST00000490231 CDHR2Q9BYE9 1310 aa20.35■□□□□ 0.85
NUP58-213ENST00000490231 CIAPIN1Q6FI81 312 aa20.35■□□□□ 0.85
NUP58-213ENST00000490231 AIDAQ96BJ3 306 aa20.35■□□□□ 0.85
NUP58-213ENST00000490231 FAM89AQ96GI7 184 aa20.35■□□□□ 0.85
NUP58-213ENST00000490231 ABT1Q9ULW3 272 aaKnown RBP20.35■□□□□ 0.85
NUP58-213ENST00000490231 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
NUP58-213ENST00000490231 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
NUP58-213ENST00000490231 PRDM10Q9NQV6 1147 aa20.34■□□□□ 0.85
NUP58-213ENST00000490231 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
NUP58-213ENST00000490231 WBP1LQ9NX94 342 aa20.34■□□□□ 0.85
NUP58-213ENST00000490231 APAF1O14727 1248 aa20.33■□□□□ 0.85
NUP58-213ENST00000490231 CTCFP49711 727 aaPredicted RBP20.33■□□□□ 0.85
NUP58-213ENST00000490231 GMPSP49915 693 aaPredicted RBP20.33■□□□□ 0.85
NUP58-213ENST00000490231 GNAI1P63096 354 aa20.33■□□□□ 0.85
NUP58-213ENST00000490231 TNIP1Q15025 636 aa20.33■□□□□ 0.85
NUP58-213ENST00000490231 ZNF428Q96B54 188 aa20.33■□□□□ 0.85
NUP58-213ENST00000490231 WDR33Q9C0J8 1336 aaKnown RBP20.32■□□□□ 0.84
NUP58-213ENST00000490231 CAPN15O75808 1086 aa20.32■□□□□ 0.84
NUP58-213ENST00000490231 DUOX1Q9NRD9 1551 aa20.32■□□□□ 0.84
NUP58-213ENST00000490231 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
NUP58-213ENST00000490231 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
NUP58-213ENST00000490231 RAD17O75943 681 aa20.31■□□□□ 0.84
NUP58-213ENST00000490231 FMR1Q06787 632 aaKnown RBP eCLIP20.31■□□□□ 0.84
NUP58-213ENST00000490231 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
NUP58-213ENST00000490231 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
NUP58-213ENST00000490231 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 TRAF5O00463 557 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
NUP58-213ENST00000490231 MAP2K1Q02750 393 aaPredicted RBP20.3■□□□□ 0.84
NUP58-213ENST00000490231 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 CST9Q5W186 159 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 ZC3H15Q8WU90 426 aaKnown RBP20.3■□□□□ 0.84
NUP58-213ENST00000490231 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
NUP58-213ENST00000490231 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
NUP58-213ENST00000490231 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
NUP58-213ENST00000490231 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
NUP58-213ENST00000490231 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
NUP58-213ENST00000490231 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
NUP58-213ENST00000490231 ECE1P42892 770 aa20.28■□□□□ 0.84
NUP58-213ENST00000490231 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
NUP58-213ENST00000490231 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
NUP58-213ENST00000490231 TLL2Q9Y6L7 1015 aa20.28■□□□□ 0.84
NUP58-213ENST00000490231 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.84
NUP58-213ENST00000490231 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
NUP58-213ENST00000490231 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
NUP58-213ENST00000490231 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
NUP58-213ENST00000490231 RPS8P62241 208 aaKnown RBP20.26■□□□□ 0.83
NUP58-213ENST00000490231 GPSM2P81274 684 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 DPF2Q92785 391 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 EYA3Q99504 573 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 POLLQ9UGP5 575 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 THSD7BQ9C0I4 1608 aa20.26■□□□□ 0.83
NUP58-213ENST00000490231 TAF1P21675 1872 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 H7C1D1 291 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 LBX1P52954 281 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 PAXIP1Q6ZW49 1069 aaPredicted RBP20.25■□□□□ 0.83
NUP58-213ENST00000490231 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 MYD88Q99836 296 aa20.25■□□□□ 0.83
NUP58-213ENST00000490231 COL4A1P02462 1669 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 PCCAP05165 728 aaPredicted RBP20.24■□□□□ 0.83
NUP58-213ENST00000490231 CCDC30Q5VVM6 783 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 CYP4F22Q6NT55 531 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 CDC37L1Q7L3B6 337 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 TBC1D16Q8TBP0 767 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
NUP58-213ENST00000490231 GLIS2Q9BZE0 524 aaPredicted RBP20.24■□□□□ 0.83
NUP58-213ENST00000490231 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
NUP58-213ENST00000490231 PSMD14O00487 310 aa20.23■□□□□ 0.83
NUP58-213ENST00000490231 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
NUP58-213ENST00000490231 CELF2O95319 508 aaKnown RBP20.23■□□□□ 0.83
NUP58-213ENST00000490231 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
NUP58-213ENST00000490231 HSPA8P11142 646 aaKnown RBP20.23■□□□□ 0.83
NUP58-213ENST00000490231 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
NUP58-213ENST00000490231 HHIPL1Q96JK4 782 aa20.23■□□□□ 0.83
NUP58-213ENST00000490231 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
NUP58-213ENST00000490231 SHTN1A0MZ66 631 aa20.22■□□□□ 0.83
NUP58-213ENST00000490231 ECE2O60344 883 aa20.22■□□□□ 0.83
NUP58-213ENST00000490231 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
NUP58-213ENST00000490231 METTL22Q9BUU2 404 aaPredicted RBP20.22■□□□□ 0.83
NUP58-213ENST00000490231 SEC31BQ9NQW1 1179 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms