RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
PLOD3-216ENST00000489927 GMPSP49915 693 aaPredicted RBP20.74■□□□□ 0.91
PLOD3-216ENST00000489927 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
PLOD3-216ENST00000489927 GRAPQ13588 217 aa20.74■□□□□ 0.91
PLOD3-216ENST00000489927 CST9Q5W186 159 aa20.74■□□□□ 0.91
PLOD3-216ENST00000489927 GRAPLQ8TC17 118 aaPredicted RBP20.74■□□□□ 0.91
PLOD3-216ENST00000489927 MYBBP1AQ9BQG0 1328 aaKnown RBP20.74■□□□□ 0.91
PLOD3-216ENST00000489927 MAP2K1Q02750 393 aaPredicted RBP20.73■□□□□ 0.91
PLOD3-216ENST00000489927 HSPA8P11142 646 aaKnown RBP20.72■□□□□ 0.91
PLOD3-216ENST00000489927 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
PLOD3-216ENST00000489927 HDGFL1Q5TGJ6 251 aa20.72■□□□□ 0.91
PLOD3-216ENST00000489927 CIAPIN1Q6FI81 312 aa20.72■□□□□ 0.91
PLOD3-216ENST00000489927 PAXIP1Q6ZW49 1069 aaPredicted RBP20.72■□□□□ 0.91
PLOD3-216ENST00000489927 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
PLOD3-216ENST00000489927 CAPNS2Q96L46 248 aa20.72■□□□□ 0.91
PLOD3-216ENST00000489927 RAD17O75943 681 aa20.71■□□□□ 0.91
PLOD3-216ENST00000489927 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
PLOD3-216ENST00000489927 GRM1Q13255 1194 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 CYP4F22Q6NT55 531 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 DUOX1Q9NRD9 1551 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 THSD7BQ9C0I4 1608 aa20.7■□□□□ 0.9
PLOD3-216ENST00000489927 TAF1P21675 1872 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 HOXB7P09629 217 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 ECE1P42892 770 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 TNIP1Q15025 636 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 WDR43Q15061 677 aaKnown RBP eCLIP20.69■□□□□ 0.9
PLOD3-216ENST00000489927 TMC4Q7Z404 712 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
PLOD3-216ENST00000489927 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 CDHR2Q9BYE9 1310 aa20.69■□□□□ 0.9
PLOD3-216ENST00000489927 DDX60Q8IY21 1712 aaKnown RBP20.68■□□□□ 0.9
PLOD3-216ENST00000489927 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
PLOD3-216ENST00000489927 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
PLOD3-216ENST00000489927 FAM89AQ96GI7 184 aa20.68■□□□□ 0.9
PLOD3-216ENST00000489927 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
PLOD3-216ENST00000489927 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
PLOD3-216ENST00000489927 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
PLOD3-216ENST00000489927 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
PLOD3-216ENST00000489927 LRRC37AA6NMS7 1700 aa20.67■□□□□ 0.9
PLOD3-216ENST00000489927 CELF2O95319 508 aaKnown RBP20.67■□□□□ 0.9
PLOD3-216ENST00000489927 CELF1Q92879 486 aaKnown RBP20.67■□□□□ 0.9
PLOD3-216ENST00000489927 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
PLOD3-216ENST00000489927 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
PLOD3-216ENST00000489927 TRPM4Q8TD43 1214 aa20.66■□□□□ 0.9
PLOD3-216ENST00000489927 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
PLOD3-216ENST00000489927 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
PLOD3-216ENST00000489927 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
PLOD3-216ENST00000489927 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
PLOD3-216ENST00000489927 SAPCD2Q86UD0 394 aa20.65■□□□□ 0.9
PLOD3-216ENST00000489927 ZC3H15Q8WU90 426 aaKnown RBP20.65■□□□□ 0.9
PLOD3-216ENST00000489927 HYPKQ9NX55 129 aa20.65■□□□□ 0.9
PLOD3-216ENST00000489927 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
PLOD3-216ENST00000489927 COL4A1P02462 1669 aa20.64■□□□□ 0.9
PLOD3-216ENST00000489927 AOC2O75106 756 aa20.64■□□□□ 0.89
PLOD3-216ENST00000489927 WASHC4Q2M389 1173 aa20.64■□□□□ 0.89
PLOD3-216ENST00000489927 BEGAINQ9BUH8 593 aa20.64■□□□□ 0.89
PLOD3-216ENST00000489927 MBIPQ9NS73 344 aa20.64■□□□□ 0.89
PLOD3-216ENST00000489927 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
PLOD3-216ENST00000489927 MICALL2Q8IY33 904 aa20.63■□□□□ 0.89
PLOD3-216ENST00000489927 DBNDD1Q9H9R9 158 aa20.63■□□□□ 0.89
PLOD3-216ENST00000489927 H7C1D1 291 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 PSMD14O00487 310 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 IRS4O14654 1257 aaPredicted RBP20.62■□□□□ 0.89
PLOD3-216ENST00000489927 RIMBP2O15034 1052 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 MAP2K2P36507 400 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 GPSM2P81274 684 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 TRIM28Q13263 835 aaKnown RBP20.62■□□□□ 0.89
PLOD3-216ENST00000489927 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 ZNF408Q9H9D4 720 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 POLLQ9UGP5 575 aa20.62■□□□□ 0.89
PLOD3-216ENST00000489927 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
PLOD3-216ENST00000489927 DPF2Q92785 391 aa20.61■□□□□ 0.89
PLOD3-216ENST00000489927 ABHD8Q96I13 439 aa20.61■□□□□ 0.89
PLOD3-216ENST00000489927 ZNF853P0CG23 659 aa20.6■□□□□ 0.89
PLOD3-216ENST00000489927 SAMD7Q7Z3H4 446 aa20.6■□□□□ 0.89
PLOD3-216ENST00000489927 HHIPL1Q96JK4 782 aa20.6■□□□□ 0.89
PLOD3-216ENST00000489927 TSKSQ9UJT2 592 aa20.6■□□□□ 0.89
PLOD3-216ENST00000489927 DOK7Q18PE1 504 aa20.59■□□□□ 0.89
PLOD3-216ENST00000489927 RIC3Q7Z5B4 369 aa20.59■□□□□ 0.89
PLOD3-216ENST00000489927 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
PLOD3-216ENST00000489927 PHAXQ9H814 394 aaKnown RBP20.59■□□□□ 0.89
PLOD3-216ENST00000489927 KCNQ5Q9NR82 932 aa20.59■□□□□ 0.89
PLOD3-216ENST00000489927 ECE2O60344 883 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 EGFRP00533 1210 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 RPS8P62241 208 aaKnown RBP20.58■□□□□ 0.89
PLOD3-216ENST00000489927 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 DLK2Q6UY11 383 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 ZBTB38Q8NAP3 1195 aaPredicted RBP20.58■□□□□ 0.89
PLOD3-216ENST00000489927 TBC1D16Q8TBP0 767 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 EYA3Q99504 573 aa20.58■□□□□ 0.89
PLOD3-216ENST00000489927 RTL9Q8NET4 1388 aa20.58■□□□□ 0.88
PLOD3-216ENST00000489927 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
PLOD3-216ENST00000489927 APAF1O14727 1248 aa20.57■□□□□ 0.88
PLOD3-216ENST00000489927 TBC1D10BQ4KMP7 808 aaPredicted RBP20.57■□□□□ 0.88
PLOD3-216ENST00000489927 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms