RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 GRAPQ13588 217 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 CC2D2BQ6DHV5 1058 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 NIM1KQ8IY84 436 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 GPC2Q8N158 579 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 MYD88Q99836 296 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
GTF3C5-210ENST00000489842 YDJCA8MPS7 323 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 TRAF5O00463 557 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 DPP8Q6V1X1 898 aaPredicted RBP11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 G2E3Q7L622 706 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 SP8Q8IXZ3 490 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 MPNDQ8N594 471 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 KCNQ5Q9NR82 932 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
GTF3C5-210ENST00000489842 IRS4O14654 1257 aaPredicted RBP11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 CAPN15O75808 1086 aa11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 HOXB7P09629 217 aa11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 GNAI1P63096 354 aa11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 GPSM2P81274 684 aa11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
GTF3C5-210ENST00000489842 WTIPA6NIX2 430 aaPredicted RBP11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 BBOX1O75936 387 aa11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 VEGFBP49765 207 aa11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 GMPSP49915 693 aaPredicted RBP11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 RTFDC1Q9BY42 306 aaPredicted RBP11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 SPEF2Q9C093 1822 aa11.8□□□□□ -0.52
GTF3C5-210ENST00000489842 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 TRPM4Q8TD43 1214 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
GTF3C5-210ENST00000489842 TMEM88BA6NKF7 163 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 MRS2Q9HD23 443 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 SCN9AQ15858 1988 aa11.78□□□□□ -0.52
GTF3C5-210ENST00000489842 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 FOXN1O15353 648 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 EGFRP00533 1210 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 GRM1Q13255 1194 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 TRIM28Q13263 835 aaKnown RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 CWF19L2Q2TBE0 894 aaKnown RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 CST9Q5W186 159 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 PNMA8AQ86V59 439 aaPredicted RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 GLIS2Q9BZE0 524 aaPredicted RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 TMX4Q9H1E5 349 aaPredicted RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
GTF3C5-210ENST00000489842 PI4KAP2A4QPH2 592 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 PSMD14O00487 310 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 PI4KAP1Q8N8J0 262 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 SUPT20HQ8NEM7 779 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 ABT1Q9ULW3 272 aaKnown RBP11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
GTF3C5-210ENST00000489842 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 CCDC30Q5VVM6 783 aa11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 TBC1D16Q8TBP0 767 aa11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 ADARB2Q9NS39 739 aaKnown RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 CNOT7Q9UIV1 285 aaKnown RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 ASTN2O75129 1339 aaPredicted RBP11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
GTF3C5-210ENST00000489842 POLR2AP24928 1970 aaKnown RBP11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 ECE2O60344 883 aa11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 DEFB115Q30KQ5 88 aa11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 TBC1D10BQ4KMP7 808 aaPredicted RBP11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 CYP4F22Q6NT55 531 aa11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 USP50Q70EL3 339 aaPredicted RBP11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
GTF3C5-210ENST00000489842 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms