RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 CREB3L3Q68CJ9 461 aa18.6■□□□□ 0.57
PTK7-216ENST00000489707 GRPEL1Q9HAV7 217 aa18.6■□□□□ 0.57
PTK7-216ENST00000489707 JCADQ9P266 1359 aa18.6■□□□□ 0.57
PTK7-216ENST00000489707 MBD3O95983 291 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTK7-216ENST00000489707 KRT32Q14532 448 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 PIGBQ92521 554 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
PTK7-216ENST00000489707 ANKRD36CQ5JPF3 1778 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 A0A0D9SFI3 127 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 EYA2O00167 538 aa18.59■□□□□ 0.57
PTK7-216ENST00000489707 EXOC5O00471 708 aa18.58■□□□□ 0.56
PTK7-216ENST00000489707 BCL9O00512 1426 aa18.58■□□□□ 0.56
PTK7-216ENST00000489707 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.56
PTK7-216ENST00000489707 COL16A1Q07092 1604 aaPredicted RBP18.57■□□□□ 0.56
PTK7-216ENST00000489707 RPAP1Q9BWH6 1393 aaPredicted RBP18.57■□□□□ 0.56
PTK7-216ENST00000489707 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
PTK7-216ENST00000489707 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 TSGA10IPQ3SY00 556 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 SMC3Q9UQE7 1217 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 ATP6V1DQ9Y5K8 247 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 SLC27A2O14975 620 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 PRPF40AO75400 957 aaKnown RBP18.57■□□□□ 0.56
PTK7-216ENST00000489707 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 DNAJC10Q8IXB1 793 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 ALDH8A1Q9H2A2 487 aaPredicted RBP18.57■□□□□ 0.56
PTK7-216ENST00000489707 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
PTK7-216ENST00000489707 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
PTK7-216ENST00000489707 LRRFIP1Q32MZ4 808 aaKnown RBP18.56■□□□□ 0.56
PTK7-216ENST00000489707 KBTBD3Q8NAB2 608 aa18.56■□□□□ 0.56
PTK7-216ENST00000489707 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
PTK7-216ENST00000489707 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
PTK7-216ENST00000489707 AKAP2Q9Y2D5 859 aa18.56■□□□□ 0.56
PTK7-216ENST00000489707 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
PTK7-216ENST00000489707 ZNF609O15014 1411 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 MYH3P11055 1940 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 NCLP19338 710 aaKnown RBP18.55■□□□□ 0.56
PTK7-216ENST00000489707 BLOC1S2Q6QNY1 142 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTK7-216ENST00000489707 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
PTK7-216ENST00000489707 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
PTK7-216ENST00000489707 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 MCMDC2Q4G0Z9 681 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
PTK7-216ENST00000489707 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
PTK7-216ENST00000489707 CEP126Q9P2H0 1117 aa18.55■□□□□ 0.56
PTK7-216ENST00000489707 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
PTK7-216ENST00000489707 TAF5LO75529 589 aa18.54■□□□□ 0.56
PTK7-216ENST00000489707 ZNF445P59923 1031 aa18.54■□□□□ 0.56
PTK7-216ENST00000489707 ADCK5Q3MIX3 580 aa18.54■□□□□ 0.56
PTK7-216ENST00000489707 ARXQ96QS3 562 aa18.54■□□□□ 0.56
PTK7-216ENST00000489707 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
PTK7-216ENST00000489707 HELLSQ9NRZ9 838 aa18.53■□□□□ 0.56
PTK7-216ENST00000489707 PAG1Q9NWQ8 432 aa18.53■□□□□ 0.56
PTK7-216ENST00000489707 TAF7LQ5H9L4 462 aa18.53■□□□□ 0.56
PTK7-216ENST00000489707 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
PTK7-216ENST00000489707 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
PTK7-216ENST00000489707 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
PTK7-216ENST00000489707 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.56
PTK7-216ENST00000489707 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
PTK7-216ENST00000489707 NUP98P52948 1817 aa18.52■□□□□ 0.56
PTK7-216ENST00000489707 STX6O43752 255 aa18.51■□□□□ 0.55
PTK7-216ENST00000489707 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 IFIT5Q13325 482 aaKnown RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 CCDC158Q5M9N0 1113 aa18.51■□□□□ 0.55
PTK7-216ENST00000489707 A0A1B0GUL7 405 aa18.51■□□□□ 0.55
PTK7-216ENST00000489707 IFIT1P09914 478 aaKnown RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 CYP19A1P11511 503 aaPredicted RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 RPS6KB1P23443 525 aa18.51■□□□□ 0.55
PTK7-216ENST00000489707 CSPP1Q1MSJ5 1256 aa18.51■□□□□ 0.55
PTK7-216ENST00000489707 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 ZNF589Q86UQ0 364 aaPredicted RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 EDC3Q96F86 508 aaKnown RBP18.51■□□□□ 0.55
PTK7-216ENST00000489707 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 CSF1RP07333 972 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 CPA1P15085 419 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 PDCP20941 246 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 ZSCAN23Q3MJ62 389 aa18.5■□□□□ 0.55
PTK7-216ENST00000489707 ERVV-1B6SEH8 477 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
PTK7-216ENST00000489707 SYT1P21579 422 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 IL6STP40189 918 aaPredicted RBP18.49■□□□□ 0.55
PTK7-216ENST00000489707 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 GORABQ5T7V8 394 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 TCHHQ07283 1943 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 GOLIM4O00461 696 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 TIMM10P62072 90 aa18.49■□□□□ 0.55
PTK7-216ENST00000489707 PHF14O94880 888 aa18.48■□□□□ 0.55
PTK7-216ENST00000489707 GPT2Q8TD30 523 aa18.48■□□□□ 0.55
PTK7-216ENST00000489707 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
PTK7-216ENST00000489707 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms