RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 DDX60Q8IY21 1712 aaKnown RBP26.67■■□□□ 1.86
SMC4-221ENST00000489573 SASH1O94885 1247 aa26.67■■□□□ 1.86
SMC4-221ENST00000489573 IFIT5Q13325 482 aaKnown RBP26.67■■□□□ 1.86
SMC4-221ENST00000489573 EN1Q05925 392 aaPredicted RBP26.67■■□□□ 1.86
SMC4-221ENST00000489573 CLASRPQ8N2M8 674 aaKnown RBP26.67■■□□□ 1.86
SMC4-221ENST00000489573 CCDC85AQ96PX6 553 aaPredicted RBP26.67■■□□□ 1.86
SMC4-221ENST00000489573 GYS1P13807 737 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 EZH2Q15910 746 aaKnown RBP26.66■■□□□ 1.86
SMC4-221ENST00000489573 C8orf34Q49A92 452 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 BMP2KLQ5H9B9 411 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 BACH2Q9BYV9 841 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 OSBPL3Q9H4L5 887 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 GREM2Q9H772 168 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 CARMIL3Q8ND23 1372 aa26.66■■□□□ 1.86
SMC4-221ENST00000489573 MX1P20591 662 aa26.65■■□□□ 1.86
SMC4-221ENST00000489573 PDE1AP54750 535 aa26.65■■□□□ 1.86
SMC4-221ENST00000489573 ERFEQ4G0M1 354 aa26.65■■□□□ 1.86
SMC4-221ENST00000489573 NBPF5PQ86XG9 351 aaPredicted RBP26.65■■□□□ 1.86
SMC4-221ENST00000489573 CIAO1O76071 339 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 ITGA6P23229 1130 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 BAG6P46379 1132 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 NFIXQ14938 502 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 TAF7LQ5H9L4 462 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 FLAD1Q8NFF5 587 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 ZNF594Q96JF6 807 aaPredicted RBP26.64■■□□□ 1.86
SMC4-221ENST00000489573 FBXO3Q9UK99 471 aa26.64■■□□□ 1.86
SMC4-221ENST00000489573 ANKRD18BA2A2Z9 1011 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 EYA2O00167 538 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 GTF2E1P29083 439 aaPredicted RBP26.63■■□□□ 1.85
SMC4-221ENST00000489573 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 TUBGCP6Q96RT7 1819 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 IL15P40933 162 aaPredicted RBP26.63■■□□□ 1.85
SMC4-221ENST00000489573 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 STAP2Q9UGK3 403 aa26.63■■□□□ 1.85
SMC4-221ENST00000489573 ABCC12Q96J65 1359 aa26.62■■□□□ 1.85
SMC4-221ENST00000489573 AOX1Q06278 1338 aa26.62■■□□□ 1.85
SMC4-221ENST00000489573 CCDC152Q4G0S7 254 aa26.62■■□□□ 1.85
SMC4-221ENST00000489573 SLC10A5Q5PT55 438 aa26.62■■□□□ 1.85
SMC4-221ENST00000489573 ATG9AQ7Z3C6 839 aa26.62■■□□□ 1.85
SMC4-221ENST00000489573 RTL9Q8NET4 1388 aa26.61■■□□□ 1.85
SMC4-221ENST00000489573 GSPT1P15170 499 aaKnown RBP26.6■■□□□ 1.85
SMC4-221ENST00000489573 TFCP2Q12800 502 aa26.6■■□□□ 1.85
SMC4-221ENST00000489573 AACSQ86V21 672 aa26.6■■□□□ 1.85
SMC4-221ENST00000489573 COL23A1Q86Y22 540 aaPredicted RBP26.6■■□□□ 1.85
SMC4-221ENST00000489573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.6■■□□□ 1.85
SMC4-221ENST00000489573 IFIT2P09913 472 aaKnown RBP26.59■■□□□ 1.85
SMC4-221ENST00000489573 LRRC24Q50LG9 513 aa26.59■■□□□ 1.85
SMC4-221ENST00000489573 LRP5O75197 1615 aa26.59■■□□□ 1.85
SMC4-221ENST00000489573 PUS3Q9BZE2 481 aaKnown RBP26.58■■□□□ 1.85
SMC4-221ENST00000489573 PNPLA7Q6ZV29 1317 aa26.58■■□□□ 1.85
SMC4-221ENST00000489573 SF3B3Q15393 1217 aaKnown RBP26.58■■□□□ 1.85
SMC4-221ENST00000489573 EAF2Q96CJ1 260 aaPredicted RBP26.58■■□□□ 1.85
SMC4-221ENST00000489573 MSH5O43196 834 aa26.57■■□□□ 1.84
SMC4-221ENST00000489573 TSHZ3Q63HK5 1081 aa26.57■■□□□ 1.84
SMC4-221ENST00000489573 CCDC125Q86Z20 511 aa26.57■■□□□ 1.84
SMC4-221ENST00000489573 ANO8Q9HCE9 1232 aaPredicted RBP26.57■■□□□ 1.84
SMC4-221ENST00000489573 STK32BQ9NY57 414 aa26.57■■□□□ 1.84
SMC4-221ENST00000489573 SRCAPQ6ZRS2 3230 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 TTC41PQ6P2S7 1318 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 NPHP1O15259 732 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 TM4SF1P30408 202 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 TNNI3KQ59H18 835 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 CNBD1Q8NA66 436 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 GPATCH3Q96I76 525 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 FPGT-TNNI3KV9GXZ4 949 aa26.56■■□□□ 1.84
SMC4-221ENST00000489573 SLC15A2Q16348 729 aa26.55■■□□□ 1.84
SMC4-221ENST00000489573 LDHAL6AQ6ZMR3 332 aa26.55■■□□□ 1.84
SMC4-221ENST00000489573 DEFB132Q7Z7B7 95 aa26.55■■□□□ 1.84
SMC4-221ENST00000489573 GPR108Q9NPR9 543 aa26.55■■□□□ 1.84
SMC4-221ENST00000489573 C3orf67Q6ZVT6 689 aa26.54■■□□□ 1.84
SMC4-221ENST00000489573 NLRP3Q96P20 1036 aa26.54■■□□□ 1.84
SMC4-221ENST00000489573 CCDC8Q9H0W5 538 aaPredicted RBP26.54■■□□□ 1.84
SMC4-221ENST00000489573 ECHDC1Q9NTX5 307 aa26.54■■□□□ 1.84
SMC4-221ENST00000489573 CEP126Q9P2H0 1117 aa26.54■■□□□ 1.84
SMC4-221ENST00000489573 RIC1Q4ADV7 1423 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 NLGN1Q8N2Q7 840 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 PI4K2BQ8TCG2 481 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 SEC31BQ9NQW1 1179 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 CNNM1Q9NRU3 951 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 RIPOR2Q9Y4F9 1068 aa26.53■■□□□ 1.84
SMC4-221ENST00000489573 SERPINB2P05120 415 aa26.52■■□□□ 1.84
SMC4-221ENST00000489573 TLR7Q9NYK1 1049 aaKnown RBP26.52■■□□□ 1.84
SMC4-221ENST00000489573 ZNF609O15014 1411 aa26.52■■□□□ 1.84
SMC4-221ENST00000489573 QSER1Q2KHR3 1735 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 ERC2O15083 957 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 DDR1Q08345 913 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 PRR5LQ6MZQ0 368 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 CCDC24Q8N4L8 307 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 CDC5LQ99459 802 aaKnown RBP26.51■■□□□ 1.83
SMC4-221ENST00000489573 CASZ1Q86V15 1759 aa26.51■■□□□ 1.83
SMC4-221ENST00000489573 POLRMTO00411 1230 aaKnown RBP26.5■■□□□ 1.83
SMC4-221ENST00000489573 GLRX3O76003 335 aaKnown RBP26.5■■□□□ 1.83
SMC4-221ENST00000489573 SDSP20132 328 aa26.5■■□□□ 1.83
SMC4-221ENST00000489573 IGHMBP2P38935 993 aaKnown RBP26.5■■□□□ 1.83
SMC4-221ENST00000489573 TNRC6CQ9HCJ0 1690 aaKnown RBP26.5■■□□□ 1.83
SMC4-221ENST00000489573 ST5P78524 1137 aa26.5■■□□□ 1.83
SMC4-221ENST00000489573 METTL24Q5JXM2 366 aa26.5■■□□□ 1.83
SMC4-221ENST00000489573 MPHOSPH8Q99549 860 aa26.5■■□□□ 1.83
SMC4-221ENST00000489573 DBNLQ9UJU6 430 aaKnown RBP26.5■■□□□ 1.83
SMC4-221ENST00000489573 CDC45O75419 566 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms