RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ITPRIPQ8IWB1 547 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 RPGRQ92834 1020 aaKnown RBP10.45□□□□□ -0.74
SF1-218ENST00000489544 MASTLQ96GX5 879 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 SF3B3Q15393 1217 aaKnown RBP10.44□□□□□ -0.74
SF1-218ENST00000489544 TTLL6Q8N841 843 aa10.44□□□□□ -0.74
SF1-218ENST00000489544 TTLL11Q8NHH1 800 aa10.44□□□□□ -0.74
SF1-218ENST00000489544 PLA2G12BQ9BX93 195 aa10.44□□□□□ -0.74
SF1-218ENST00000489544 BICC1Q9H694 974 aaKnown RBP10.44□□□□□ -0.74
SF1-218ENST00000489544 GREM2Q9H772 168 aa10.44□□□□□ -0.74
SF1-218ENST00000489544 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
SF1-218ENST00000489544 UBTFL1P0CB47 393 aaPredicted RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 HOXA10P31260 410 aaPredicted RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 GPR162Q16538 588 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 FAM161AQ3B820 660 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 STYK1Q6J9G0 422 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 LMBR1LQ6UX01 489 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 ANKRD44Q8N8A2 993 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 CELF1Q92879 486 aaKnown RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 RBM17Q96I25 401 aaKnown RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 CHMP3Q9Y3E7 222 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 LRRFIP2Q9Y608 721 aaKnown RBP10.43□□□□□ -0.74
SF1-218ENST00000489544 LAMB2P55268 1798 aa10.43□□□□□ -0.74
SF1-218ENST00000489544 ZBTB7BO15156 539 aaPredicted RBP10.42□□□□□ -0.74
SF1-218ENST00000489544 C21orf2O43822 256 aa10.42□□□□□ -0.74
SF1-218ENST00000489544 CSF1RP07333 972 aa10.42□□□□□ -0.74
SF1-218ENST00000489544 HOXD11P31277 338 aaPredicted RBP10.42□□□□□ -0.74
SF1-218ENST00000489544 CCDC152Q4G0S7 254 aa10.42□□□□□ -0.74
SF1-218ENST00000489544 DDX46Q7L014 1031 aaKnown RBP10.42□□□□□ -0.74
SF1-218ENST00000489544 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
SF1-218ENST00000489544 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
SF1-218ENST00000489544 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
SF1-218ENST00000489544 TAF1P21675 1872 aa10.42□□□□□ -0.74
SF1-218ENST00000489544 ITGA6P23229 1130 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 IRX6P78412 446 aaPredicted RBP10.41□□□□□ -0.74
SF1-218ENST00000489544 GRAPQ13588 217 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 MVPQ14764 893 aaKnown RBP10.41□□□□□ -0.74
SF1-218ENST00000489544 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
SF1-218ENST00000489544 C7orf43Q8WVR3 580 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 ZNF594Q96JF6 807 aaPredicted RBP10.41□□□□□ -0.74
SF1-218ENST00000489544 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 SLX4Q8IY92 1834 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 UTRNP46939 3433 aa10.41□□□□□ -0.74
SF1-218ENST00000489544 BRCA1P38398 1863 aaKnown RBP10.4□□□□□ -0.74
SF1-218ENST00000489544 DLEC1Q9Y238 1755 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.74
SF1-218ENST00000489544 GNAI3P08754 354 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 MS4A1P11836 297 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 HSP90B1P14625 803 aaKnown RBP10.4□□□□□ -0.74
SF1-218ENST00000489544 ALDH1B1P30837 517 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 PDE3AQ14432 1141 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 KLHDC4Q8TBB5 520 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 CRBNQ96SW2 442 aa10.4□□□□□ -0.74
SF1-218ENST00000489544 CACNA1SQ13698 1873 aa10.4□□□□□ -0.75
SF1-218ENST00000489544 GNAI2P04899 355 aa10.39□□□□□ -0.75
SF1-218ENST00000489544 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
SF1-218ENST00000489544 RABL6Q3YEC7 729 aaPredicted RBP10.39□□□□□ -0.75
SF1-218ENST00000489544 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
SF1-218ENST00000489544 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 ANKRD18BA2A2Z9 1011 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
SF1-218ENST00000489544 PRELPP51888 382 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 RASSF7Q02833 373 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 IFIT5Q13325 482 aaKnown RBP10.38□□□□□ -0.75
SF1-218ENST00000489544 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 PUS3Q9BZE2 481 aaKnown RBP10.38□□□□□ -0.75
SF1-218ENST00000489544 ATP6V0A2Q9Y487 856 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 RTL9Q8NET4 1388 aa10.38□□□□□ -0.75
SF1-218ENST00000489544 NFKBIEO00221 500 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 BBOX1O75936 387 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 RFX5P48382 616 aaPredicted RBP10.37□□□□□ -0.75
SF1-218ENST00000489544 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 GPR101Q96P66 508 aaPredicted RBP10.37□□□□□ -0.75
SF1-218ENST00000489544 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
SF1-218ENST00000489544 ZBTB40Q9NUA8 1239 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 DDX19BQ9UMR2 479 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 PA2G4Q9UQ80 394 aaKnown RBP10.37□□□□□ -0.75
SF1-218ENST00000489544 MYH3P11055 1940 aa10.37□□□□□ -0.75
SF1-218ENST00000489544 SNAP23O00161 211 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 IGHMBP2P38935 993 aaKnown RBP10.36□□□□□ -0.75
SF1-218ENST00000489544 GPSM2P81274 684 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 LRRC24Q50LG9 513 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 TAF7LQ5H9L4 462 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
SF1-218ENST00000489544 SIL1Q9H173 461 aa10.36□□□□□ -0.75
SF1-218ENST00000489544 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 GRIN3BO60391 1043 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 TAF5LO75529 589 aa10.35□□□□□ -0.75
SF1-218ENST00000489544 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
SF1-218ENST00000489544 CEP85Q6P2H3 762 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms