RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 OLFM4Q6UX06 510 aa18.21■□□□□ 0.51
HLA-F-229ENST00000489502 C21orf2O43822 256 aa18.2■□□□□ 0.5
HLA-F-229ENST00000489502 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
HLA-F-229ENST00000489502 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
HLA-F-229ENST00000489502 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
HLA-F-229ENST00000489502 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
HLA-F-229ENST00000489502 PPEF1O14829 653 aaPredicted RBP18.19■□□□□ 0.5
HLA-F-229ENST00000489502 GRIN3BO60391 1043 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 FER1L6Q2WGJ9 1857 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 EPHA10Q5JZY3 1008 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
HLA-F-229ENST00000489502 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 CRAMP1Q96RY5 1269 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
HLA-F-229ENST00000489502 CHD4Q14839 1912 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 RLBP1P12271 317 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 RASSF7Q02833 373 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
HLA-F-229ENST00000489502 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
HLA-F-229ENST00000489502 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 GREM2Q9H772 168 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 UTYO14607 1347 aa18.18■□□□□ 0.5
HLA-F-229ENST00000489502 PLIN1O60240 522 aa18.17■□□□□ 0.5
HLA-F-229ENST00000489502 GRAPQ13588 217 aa18.17■□□□□ 0.5
HLA-F-229ENST00000489502 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
HLA-F-229ENST00000489502 ARHGAP27Q6ZUM4 889 aa18.17■□□□□ 0.5
HLA-F-229ENST00000489502 TTLL11Q8NHH1 800 aa18.17■□□□□ 0.5
HLA-F-229ENST00000489502 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
HLA-F-229ENST00000489502 USP44Q9H0E7 712 aa18.17■□□□□ 0.5
HLA-F-229ENST00000489502 SNED1Q8TER0 1413 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 FOXO4P98177 505 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
HLA-F-229ENST00000489502 C7orf43Q8WVR3 580 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 MEIS3Q99687 375 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 RTL9Q8NET4 1388 aa18.16■□□□□ 0.5
HLA-F-229ENST00000489502 NFKBIEO00221 500 aa18.15■□□□□ 0.5
HLA-F-229ENST00000489502 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
HLA-F-229ENST00000489502 PANK1Q8TE04 598 aa18.15■□□□□ 0.5
HLA-F-229ENST00000489502 CHMP3Q9Y3E7 222 aa18.15■□□□□ 0.5
HLA-F-229ENST00000489502 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
HLA-F-229ENST00000489502 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
HLA-F-229ENST00000489502 SBF1O95248 1867 aa18.14■□□□□ 0.49
HLA-F-229ENST00000489502 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
HLA-F-229ENST00000489502 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
HLA-F-229ENST00000489502 ITPRIPQ8IWB1 547 aa18.13■□□□□ 0.49
HLA-F-229ENST00000489502 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
HLA-F-229ENST00000489502 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
HLA-F-229ENST00000489502 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 CSF1RP07333 972 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 ITGA6P23229 1130 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 SOGA3Q5TF21 947 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
HLA-F-229ENST00000489502 BBOX1O75936 387 aa18.11■□□□□ 0.49
HLA-F-229ENST00000489502 PRELPP51888 382 aa18.11■□□□□ 0.49
HLA-F-229ENST00000489502 ANKRD18AQ8IVF6 992 aa18.11■□□□□ 0.49
HLA-F-229ENST00000489502 CDC5LQ99459 802 aaKnown RBP18.11■□□□□ 0.49
HLA-F-229ENST00000489502 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
HLA-F-229ENST00000489502 LRRFIP2Q9Y608 721 aaKnown RBP18.11■□□□□ 0.49
HLA-F-229ENST00000489502 A0A1B0GUL6 1792 aa18.11■□□□□ 0.49
HLA-F-229ENST00000489502 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
HLA-F-229ENST00000489502 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
HLA-F-229ENST00000489502 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
HLA-F-229ENST00000489502 LTBP3Q9NS15 1303 aa18.08■□□□□ 0.49
HLA-F-229ENST00000489502 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 GNAI3P08754 354 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 FKBP4Q02790 459 aaKnown RBP eCLIP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 IFIT5Q13325 482 aaKnown RBP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 TMC4Q7Z404 712 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 SP8Q8IXZ3 490 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 RNF181Q9P0P0 153 aa18.08■□□□□ 0.48
HLA-F-229ENST00000489502 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.48
HLA-F-229ENST00000489502 COL4A5P29400 1685 aa18.07■□□□□ 0.48
HLA-F-229ENST00000489502 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
HLA-F-229ENST00000489502 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
HLA-F-229ENST00000489502 RTKN2Q8IZC4 609 aa18.07■□□□□ 0.48
HLA-F-229ENST00000489502 TMX4Q9H1E5 349 aaPredicted RBP18.07■□□□□ 0.48
HLA-F-229ENST00000489502 C1orf115Q9H7X2 142 aa18.07■□□□□ 0.48
HLA-F-229ENST00000489502 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
HLA-F-229ENST00000489502 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
HLA-F-229ENST00000489502 MS4A1P11836 297 aa18.06■□□□□ 0.48
HLA-F-229ENST00000489502 LMNB1P20700 586 aa18.06■□□□□ 0.48
HLA-F-229ENST00000489502 GPSM2P81274 684 aa18.06■□□□□ 0.48
HLA-F-229ENST00000489502 CCDC57Q2TAC2 916 aa18.06■□□□□ 0.48
HLA-F-229ENST00000489502 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
HLA-F-229ENST00000489502 DPP8Q6V1X1 898 aaPredicted RBP18.06■□□□□ 0.48
HLA-F-229ENST00000489502 MVPQ14764 893 aaKnown RBP18.05■□□□□ 0.48
HLA-F-229ENST00000489502 MPNDQ8N594 471 aa18.05■□□□□ 0.48
HLA-F-229ENST00000489502 PSMD1Q99460 953 aa18.05■□□□□ 0.48
HLA-F-229ENST00000489502 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
HLA-F-229ENST00000489502 GNAI2P04899 355 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms