RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 KAT14Q9H8E8 782 aa20.22■□□□□ 0.83
NPHP4-209ENST00000489180 MICALCLQ6ZW33 695 aa20.22■□□□□ 0.83
NPHP4-209ENST00000489180 AMPD3Q01432 767 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 C14orf93Q9H972 538 aaKnown RBP20.21■□□□□ 0.83
NPHP4-209ENST00000489180 SMC1AQ14683 1233 aaKnown RBP20.21■□□□□ 0.83
NPHP4-209ENST00000489180 ARHGAP45Q92619 1136 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 SCLT1Q96NL6 688 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 KANK3Q6NY19 840 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 MMRN2Q9H8L6 949 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 KIF20AO95235 890 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 ALG1Q9BT22 464 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 ADGRL1O94910 1474 aa20.21■□□□□ 0.83
NPHP4-209ENST00000489180 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
NPHP4-209ENST00000489180 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
NPHP4-209ENST00000489180 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
NPHP4-209ENST00000489180 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
NPHP4-209ENST00000489180 CAVIN2O95810 425 aa20.2■□□□□ 0.82
NPHP4-209ENST00000489180 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
NPHP4-209ENST00000489180 ZGPATQ8N5A5 531 aaKnown RBP20.2■□□□□ 0.82
NPHP4-209ENST00000489180 RLBP1P12271 317 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 FAM114A1Q8IWE2 563 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 ACEP12821 1306 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 SEC24BO95487 1268 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 SNX21Q969T3 373 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 CCDC175P0C221 793 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 KIF5BP33176 963 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 MRPS27Q92552 414 aaKnown RBP20.19■□□□□ 0.82
NPHP4-209ENST00000489180 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
NPHP4-209ENST00000489180 KRT222Q8N1A0 295 aa20.19■□□□□ 0.82
NPHP4-209ENST00000489180 ATP2C2O75185 946 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 IPO4Q8TEX9 1081 aaKnown RBP20.18■□□□□ 0.82
NPHP4-209ENST00000489180 PA2G4Q9UQ80 394 aaKnown RBP20.18■□□□□ 0.82
NPHP4-209ENST00000489180 ZKSCAN5Q9Y2L8 839 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 PRC1O43663 620 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-209ENST00000489180 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
NPHP4-209ENST00000489180 WTAPQ15007 396 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 ZMYND15Q9H091 742 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 GPATCH11Q8N954 259 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 EXOC1Q9NV70 894 aa20.18■□□□□ 0.82
NPHP4-209ENST00000489180 POGZQ7Z3K3 1410 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 CTNNA2P26232 953 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 PPP4R3AQ6IN85 833 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 PDE4BQ07343 736 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
NPHP4-209ENST00000489180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.17■□□□□ 0.827e-12■■■■□ 24.5
NPHP4-209ENST00000489180 ZBTB43O43298 467 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 AKR1B10O60218 316 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 RBM25P49756 843 aaKnown RBP20.17■□□□□ 0.82
NPHP4-209ENST00000489180 CD109Q6YHK3 1445 aa20.17■□□□□ 0.82
NPHP4-209ENST00000489180 SYT1P21579 422 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 PTGS1P23219 599 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 RAB3GAP1Q15042 981 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 CHST3Q7LGC8 479 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 HOOK3Q86VS8 718 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 MCM6Q14566 821 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 RALGAPBQ86X10 1494 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
NPHP4-209ENST00000489180 KCNG4Q8TDN1 519 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 IQSEC3Q9UPP2 1182 aaPredicted RBP20.16■□□□□ 0.82
NPHP4-209ENST00000489180 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
NPHP4-209ENST00000489180 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 AK2P54819 239 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 HSF2BPO75031 334 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 TYRO3Q06418 890 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
NPHP4-209ENST00000489180 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 C6orf229H3BNL8 230 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 SYCP3Q8IZU3 236 aa20.15■□□□□ 0.82
NPHP4-209ENST00000489180 SNRPA1P09661 255 aaKnown RBP20.14■□□□□ 0.82
NPHP4-209ENST00000489180 STAT6P42226 847 aa20.14■□□□□ 0.82
NPHP4-209ENST00000489180 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.82
NPHP4-209ENST00000489180 CTAGE15A4D2H0 777 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 CTAGE8P0CG41 777 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 CTAGE6Q86UF2 777 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 CTAGE4Q8IX94 777 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.14■□□□□ 0.81
NPHP4-209ENST00000489180 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 RTL1A6NKG5 1358 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 CETN1Q12798 172 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
NPHP4-209ENST00000489180 PYM1Q9BRP8 204 aaKnown RBP20.13■□□□□ 0.81
NPHP4-209ENST00000489180 STX8Q9UNK0 236 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 KRT28Q7Z3Y7 464 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 SRRTQ9BXP5 876 aaKnown RBP20.13■□□□□ 0.81
NPHP4-209ENST00000489180 ARFGAP3Q9NP61 516 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 RMND1Q9NWS8 449 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 EHBP1Q8NDI1 1231 aa20.13■□□□□ 0.81
NPHP4-209ENST00000489180 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms