RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 RARAP10276 462 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 IGFBP4P22692 258 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
CCDC93-209ENST00000488908 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
CCDC93-209ENST00000488908 ARSDP51689 593 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 MLLT1Q03111 559 aaPredicted RBP6.76□□□□□ -1.33
CCDC93-209ENST00000488908 FLIIQ13045 1269 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 LARP1Q6PKG0 1096 aaKnown RBP6.76□□□□□ -1.33
CCDC93-209ENST00000488908 SMG9Q9H0W8 520 aaKnown RBP6.76□□□□□ -1.33
CCDC93-209ENST00000488908 GOLGA2P5Q9HBQ8 144 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 PCMTD2Q9NV79 361 aa6.76□□□□□ -1.33
CCDC93-209ENST00000488908 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
CCDC93-209ENST00000488908 PLAURQ03405 335 aa6.75□□□□□ -1.33
CCDC93-209ENST00000488908 MCTP1Q6DN14 999 aa6.75□□□□□ -1.33
CCDC93-209ENST00000488908 DZIP1LQ8IYY4 767 aaKnown RBP6.75□□□□□ -1.33
CCDC93-209ENST00000488908 IFT43Q96FT9 208 aa6.75□□□□□ -1.33
CCDC93-209ENST00000488908 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
CCDC93-209ENST00000488908 KLK14Q9P0G3 267 aa6.75□□□□□ -1.33
CCDC93-209ENST00000488908 DLL1O00548 723 aa6.74□□□□□ -1.33
CCDC93-209ENST00000488908 SASH3O75995 380 aa6.74□□□□□ -1.33
CCDC93-209ENST00000488908 EIF2AK2P19525 551 aaKnown RBP6.74□□□□□ -1.33
CCDC93-209ENST00000488908 NRLP54845 237 aa6.74□□□□□ -1.33
CCDC93-209ENST00000488908 DGKZQ13574 1117 aa6.74□□□□□ -1.33
CCDC93-209ENST00000488908 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
CCDC93-209ENST00000488908 TFIP11Q9UBB9 837 aaKnown RBP6.74□□□□□ -1.33
CCDC93-209ENST00000488908 MAFBQ9Y5Q3 323 aaPredicted RBP6.74□□□□□ -1.33
CCDC93-209ENST00000488908 FSTP19883 344 aa6.73□□□□□ -1.33
CCDC93-209ENST00000488908 HFE2Q6ZVN8 426 aa6.73□□□□□ -1.33
CCDC93-209ENST00000488908 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
CCDC93-209ENST00000488908 DCAF11Q8TEB1 546 aa6.73□□□□□ -1.33
CCDC93-209ENST00000488908 LGR5O75473 907 aa6.72□□□□□ -1.33
CCDC93-209ENST00000488908 MICAL2O94851 1124 aa6.72□□□□□ -1.33
CCDC93-209ENST00000488908 DPYDQ12882 1025 aa6.72□□□□□ -1.33
CCDC93-209ENST00000488908 PTK7Q13308 1070 aa6.72□□□□□ -1.33
CCDC93-209ENST00000488908 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
CCDC93-209ENST00000488908 SRA1Q9HD15 236 aaKnown RBP6.72□□□□□ -1.33
CCDC93-209ENST00000488908 PAX4O43316 350 aa6.71□□□□□ -1.34
CCDC93-209ENST00000488908 C11orf91Q3C1V1 193 aa6.71□□□□□ -1.34
CCDC93-209ENST00000488908 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
CCDC93-209ENST00000488908 GLMNQ92990 594 aa6.71□□□□□ -1.34
CCDC93-209ENST00000488908 VTI1AQ96AJ9 217 aa6.71□□□□□ -1.34
CCDC93-209ENST00000488908 PLD4Q96BZ4 506 aa6.71□□□□□ -1.34
CCDC93-209ENST00000488908 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
CCDC93-209ENST00000488908 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
CCDC93-209ENST00000488908 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-209ENST00000488908 FOXO3O43524 673 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 PTCD1O75127 700 aaKnown RBP6.7□□□□□ -1.34
CCDC93-209ENST00000488908 ALX3O95076 343 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 EGFRP00533 1210 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 SSTR4P31391 388 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 CD97P48960 835 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
CCDC93-209ENST00000488908 COL17A1Q9UMD9 1497 aaPredicted RBP6.7□□□□□ -1.34
CCDC93-209ENST00000488908 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 FAM196BA6NMK8 535 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 GSC2O15499 205 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 GHRHP01286 108 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 PSAPP07602 524 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 SIK1P57059 783 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 GDF6Q6KF10 455 aaPredicted RBP6.69□□□□□ -1.34
CCDC93-209ENST00000488908 ANKMY2Q8IV38 441 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 IL22RA1Q8N6P7 574 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 MYO19Q96H55 970 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 KRTAP9-4Q9BYQ2 154 aa6.69□□□□□ -1.34
CCDC93-209ENST00000488908 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L21D6R901 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 XYLBO75191 536 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
CCDC93-209ENST00000488908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC93-209ENST00000488908 J3QW42 95 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 GLB1P16278 677 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 WEE1P30291 646 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 SOX18P35713 384 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 TXKP42681 527 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 IRAK1P51617 712 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 KANK4Q5T7N3 995 aaPredicted RBP6.67□□□□□ -1.34
CCDC93-209ENST00000488908 Q6ZS46 218 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 RGL4Q8IZJ4 473 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 CMTR1Q8N1G2 835 aaKnown RBP6.67□□□□□ -1.34
CCDC93-209ENST00000488908 NSUN5Q96P11 429 aaKnown RBP6.67□□□□□ -1.34
CCDC93-209ENST00000488908 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
CCDC93-209ENST00000488908 OPLAHO14841 1288 aa6.66□□□□□ -1.34
CCDC93-209ENST00000488908 SETDB1Q15047 1291 aa6.66□□□□□ -1.34
CCDC93-209ENST00000488908 CACTIN-AS1Q8N1I8 211 aa6.66□□□□□ -1.34
CCDC93-209ENST00000488908 PPP1R12CQ9BZL4 782 aa6.66□□□□□ -1.34
CCDC93-209ENST00000488908 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
CCDC93-209ENST00000488908 USP20Q9Y2K6 914 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms