RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 PTH1RQ03431 593 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 NMIQ13287 307 aaPredicted RBP8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 IFIT5Q13325 482 aaKnown RBP8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 NECTIN1Q15223 517 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 MAP4K1Q92918 833 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 AK7Q96M32 723 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 CWC22Q9HCG8 908 aaKnown RBP8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 CEP126Q9P2H0 1117 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 TRMT112Q9UI30 125 aaKnown RBP8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 SNX14Q9Y5W7 946 aa8.15□□□□□ -1.1
RN7SL561P-201ENST00000488553 TJP1Q07157 1748 aa8.15□□□□□ -1.11
RN7SL561P-201ENST00000488553 PALLDQ8WX93 1383 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 PDE8AO60658 829 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 CAMTA2O94983 1202 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 HSP90AA1P07900 732 aaKnown RBP8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 MCM4P33991 863 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 RAB3GAP1Q15042 981 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 RASEFQ8IZ41 740 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 FSD1Q9BTV5 496 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 USP21Q9UK80 565 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 AKAP2Q9Y2D5 859 aa8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 AFDNP55196 1824 aaKnown RBP8.14□□□□□ -1.11
RN7SL561P-201ENST00000488553 RFX7Q2KHR2 1363 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 CCDC171Q6TFL3 1326 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 UBN2Q6ZU65 1347 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 RGL2O15211 777 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 TAF5LO75529 589 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 DEKP35659 375 aaKnown RBP8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 CTSWP56202 376 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 CUL4AQ13619 759 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 PARP10Q53GL7 1025 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 SUSD4Q5VX71 490 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 CLEC17AQ6ZS10 378 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 EDC3Q96F86 508 aaKnown RBP8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 TMX3Q96JJ7 454 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 TTC14Q96N46 770 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 TM6SF1Q9BZW5 370 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 FOXD4L1Q9NU39 408 aa8.13□□□□□ -1.11
RN7SL561P-201ENST00000488553 A0A0D9SFI3 127 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 A0A1B0GUL7 405 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 ANKRD18BA2A2Z9 1011 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 ITGA6P23229 1130 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 TSGA10IPQ3SY00 556 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 RC3H1Q5TC82 1133 aaKnown RBP8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 USPL1Q5W0Q7 1092 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 CLEC4GQ6UXB4 293 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 LDHAL6AQ6ZMR3 332 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 KBTBD3Q8NAB2 608 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 UPF3BQ9BZI7 483 aaKnown RBP8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 GREM2Q9H772 168 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 DOT1LQ8TEK3 1739 aa8.12□□□□□ -1.11
RN7SL561P-201ENST00000488553 MED23Q9ULK4 1368 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 SH3TC1Q8TE82 1336 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 A0A0G2JS52 829 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 IFIT1P09914 478 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 NUCB2P80303 420 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 GSE1Q14687 1217 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 MCMDC2Q4G0Z9 681 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 TAF7LQ5H9L4 462 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 PTF1AQ7RTS3 328 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZGPATQ8N5A5 531 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 LINC00116Q8NCU8 138 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZNF512BQ96KM6 892 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 DNAJC2Q99543 621 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 ALDH8A1Q9H2A2 487 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 HELLSQ9NRZ9 838 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 PAG1Q9NWQ8 432 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 RREB1Q92766 1687 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZNF609O15014 1411 aa8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 CICQ96RK0 1608 aaPredicted RBP8.11□□□□□ -1.11
RN7SL561P-201ENST00000488553 GOLIM4O00461 696 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 SLC27A2O14975 620 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 RNF113AO15541 343 aaKnown RBP8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 RPS6KA4O75676 772 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 NTSR2O95665 410 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 HSP90B1P14625 803 aaKnown RBP8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZKSCAN1P17029 563 aaPredicted RBP8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 SSFA2P28290 1259 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 ADORA1P30542 326 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 HSPA1LP34931 641 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms