RNA–Protein interactions for RNA: ENST00000488198.5

CSF1-206, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 1,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-206ENST00000488198 RCAN3Q9UKA8 241 aa22.23■■□□□ 1.15
CSF1-206ENST00000488198 HDAC5Q9UQL6 1122 aa22.23■■□□□ 1.15
CSF1-206ENST00000488198 ABCC4O15439 1325 aa22.23■■□□□ 1.15
CSF1-206ENST00000488198 TRIM27P14373 513 aa22.22■■□□□ 1.15
CSF1-206ENST00000488198 RTKN2Q8IZC4 609 aa22.22■■□□□ 1.15
CSF1-206ENST00000488198 UTYO14607 1347 aa22.22■■□□□ 1.15
CSF1-206ENST00000488198 BRCA1P38398 1863 aaKnown RBP22.22■■□□□ 1.15
CSF1-206ENST00000488198 MS4A1P11836 297 aa22.21■■□□□ 1.15
CSF1-206ENST00000488198 C7orf43Q8WVR3 580 aa22.21■■□□□ 1.15
CSF1-206ENST00000488198 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
CSF1-206ENST00000488198 INTS3Q68E01 1043 aaKnown RBP22.2■■□□□ 1.14
CSF1-206ENST00000488198 TTLL11Q8NHH1 800 aa22.2■■□□□ 1.14
CSF1-206ENST00000488198 CDC5LQ99459 802 aaKnown RBP22.2■■□□□ 1.14
CSF1-206ENST00000488198 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
CSF1-206ENST00000488198 RTL9Q8NET4 1388 aa22.2■■□□□ 1.14
CSF1-206ENST00000488198 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
CSF1-206ENST00000488198 LTBP3Q9NS15 1303 aa22.18■■□□□ 1.14
CSF1-206ENST00000488198 CSF1RP07333 972 aa22.18■■□□□ 1.14
CSF1-206ENST00000488198 RPS8P62241 208 aaKnown RBP22.18■■□□□ 1.14
CSF1-206ENST00000488198 SP8Q8IXZ3 490 aa22.18■■□□□ 1.14
CSF1-206ENST00000488198 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
CSF1-206ENST00000488198 ARFGEF1Q9Y6D6 1849 aa22.17■■□□□ 1.14
CSF1-206ENST00000488198 LAMB2P55268 1798 aa22.17■■□□□ 1.14
CSF1-206ENST00000488198 NBPF7P0C2Y1 421 aaPredicted RBP22.17■■□□□ 1.14
CSF1-206ENST00000488198 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
CSF1-206ENST00000488198 USP44Q9H0E7 712 aa22.17■■□□□ 1.14
CSF1-206ENST00000488198 UTRNP46939 3433 aa22.17■■□□□ 1.14
CSF1-206ENST00000488198 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
CSF1-206ENST00000488198 ANKRD18AQ8IVF6 992 aa22.16■■□□□ 1.14
CSF1-206ENST00000488198 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
CSF1-206ENST00000488198 CELF1Q92879 486 aaKnown RBP22.16■■□□□ 1.14
CSF1-206ENST00000488198 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
CSF1-206ENST00000488198 LMNB1P20700 586 aa22.15■■□□□ 1.14
CSF1-206ENST00000488198 FOXO4P98177 505 aa22.15■■□□□ 1.14
CSF1-206ENST00000488198 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
CSF1-206ENST00000488198 CCDC85AQ96PX6 553 aaPredicted RBP22.15■■□□□ 1.14
CSF1-206ENST00000488198 GREM2Q9H772 168 aa22.15■■□□□ 1.14
CSF1-206ENST00000488198 NFKBIEO00221 500 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 GNAI3P08754 354 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 IGHMBP2P38935 993 aaKnown RBP22.14■■□□□ 1.13
CSF1-206ENST00000488198 FKBP4Q02790 459 aaKnown RBP eCLIP22.14■■□□□ 1.13
CSF1-206ENST00000488198 SUPT20HQ8NEM7 779 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 PSMD1Q99460 953 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 SEC31BQ9NQW1 1179 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
CSF1-206ENST00000488198 ANKRD18BA2A2Z9 1011 aa22.13■■□□□ 1.13
CSF1-206ENST00000488198 ITGA6P23229 1130 aa22.13■■□□□ 1.13
CSF1-206ENST00000488198 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
CSF1-206ENST00000488198 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
CSF1-206ENST00000488198 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
CSF1-206ENST00000488198 SUCLG2Q96I99 432 aa22.13■■□□□ 1.13
CSF1-206ENST00000488198 YY1P25490 414 aa22.12■■□□□ 1.13
CSF1-206ENST00000488198 FAM161AQ3B820 660 aa22.12■■□□□ 1.13
CSF1-206ENST00000488198 SLX4Q8IY92 1834 aa22.12■■□□□ 1.13
CSF1-206ENST00000488198 RASSF7Q02833 373 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 RABL6Q3YEC7 729 aaPredicted RBP22.11■■□□□ 1.13
CSF1-206ENST00000488198 C9orf131Q5VYM1 1079 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 DPP8Q6V1X1 898 aaPredicted RBP22.11■■□□□ 1.13
CSF1-206ENST00000488198 MPNDQ8N594 471 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 MPHOSPH8Q99549 860 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 BSDC1Q9NW68 430 aaPredicted RBP22.11■■□□□ 1.13
CSF1-206ENST00000488198 RNF181Q9P0P0 153 aa22.11■■□□□ 1.13
CSF1-206ENST00000488198 EPHA10Q5JZY3 1008 aa22.1■■□□□ 1.13
CSF1-206ENST00000488198 TMEM57Q8N5G2 664 aa22.1■■□□□ 1.13
CSF1-206ENST00000488198 BICC1Q9H694 974 aaKnown RBP22.1■■□□□ 1.13
CSF1-206ENST00000488198 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
CSF1-206ENST00000488198 ZC3H4Q9UPT8 1303 aaKnown RBP22.09■■□□□ 1.13
CSF1-206ENST00000488198 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
CSF1-206ENST00000488198 OLFM4Q6UX06 510 aa22.09■■□□□ 1.13
CSF1-206ENST00000488198 ITPRIPQ8IWB1 547 aa22.08■■□□□ 1.13
CSF1-206ENST00000488198 KAZALD1Q96I82 304 aa22.08■■□□□ 1.13
CSF1-206ENST00000488198 RTFDC1Q9BY42 306 aaPredicted RBP22.08■■□□□ 1.13
CSF1-206ENST00000488198 CHMP4BQ9H444 224 aaKnown RBP22.08■■□□□ 1.13
CSF1-206ENST00000488198 TNNQ9UQP3 1299 aa22.08■■□□□ 1.13
CSF1-206ENST00000488198 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
CSF1-206ENST00000488198 MEIS3Q99687 375 aa22.07■■□□□ 1.12
CSF1-206ENST00000488198 ANKIB1Q9P2G1 1089 aa22.07■■□□□ 1.12
CSF1-206ENST00000488198 NSFL1CQ9UNZ2 370 aaKnown RBP22.07■■□□□ 1.12
CSF1-206ENST00000488198 IARSP41252 1262 aaKnown RBP22.06■■□□□ 1.12
CSF1-206ENST00000488198 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
CSF1-206ENST00000488198 PODXL2Q9NZ53 605 aa22.06■■□□□ 1.12
CSF1-206ENST00000488198 GNAI2P04899 355 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 PDE3AQ14432 1141 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 JDP2Q8WYK2 163 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 EYA3Q99504 573 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 ANKRD2Q9GZV1 360 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 ZNF277Q9NRM2 450 aaPredicted RBP22.05■■□□□ 1.12
CSF1-206ENST00000488198 LRRFIP2Q9Y608 721 aaKnown RBP22.05■■□□□ 1.12
CSF1-206ENST00000488198 XDHP47989 1333 aa22.05■■□□□ 1.12
CSF1-206ENST00000488198 GPSM2P81274 684 aa22.04■■□□□ 1.12
CSF1-206ENST00000488198 RLBP1P12271 317 aa22.03■■□□□ 1.12
CSF1-206ENST00000488198 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
CSF1-206ENST00000488198 PANK1Q8TE04 598 aa22.03■■□□□ 1.12
CSF1-206ENST00000488198 GGA1Q9UJY5 639 aa22.03■■□□□ 1.12
CSF1-206ENST00000488198 MINPP1Q9UNW1 487 aa22.03■■□□□ 1.12
CSF1-206ENST00000488198 C6orf229H3BNL8 230 aa22.02■■□□□ 1.12
CSF1-206ENST00000488198 ATP2B4P23634 1241 aa22.02■■□□□ 1.12
CSF1-206ENST00000488198 LARGE2Q8N3Y3 721 aa22.02■■□□□ 1.12
CSF1-206ENST00000488198 CNNM1Q9NRU3 951 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms