RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RFC4P35249 363 aa16.68■□□□□ 0.26
COPS7B-221ENST00000488111 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
COPS7B-221ENST00000488111 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
COPS7B-221ENST00000488111 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
COPS7B-221ENST00000488111 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
COPS7B-221ENST00000488111 SUSD4Q5VX71 490 aa16.67■□□□□ 0.26
COPS7B-221ENST00000488111 MAP7D2Q96T17 732 aa16.67■□□□□ 0.26
COPS7B-221ENST00000488111 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
COPS7B-221ENST00000488111 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
COPS7B-221ENST00000488111 NASPP49321 788 aaPredicted RBP16.66■□□□□ 0.26
COPS7B-221ENST00000488111 POLA2Q14181 598 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 NUP98P52948 1817 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
COPS7B-221ENST00000488111 FOXO4P98177 505 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 NUCB1Q02818 461 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
COPS7B-221ENST00000488111 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
COPS7B-221ENST00000488111 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
COPS7B-221ENST00000488111 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
COPS7B-221ENST00000488111 MTX1Q13505 466 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 DEFB132Q7Z7B7 95 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
COPS7B-221ENST00000488111 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 CLEC17AQ6ZS10 378 aa16.65■□□□□ 0.26
COPS7B-221ENST00000488111 HS1BP3Q53T59 392 aa16.64■□□□□ 0.25
COPS7B-221ENST00000488111 CAMKK2Q96RR4 588 aa16.64■□□□□ 0.25
COPS7B-221ENST00000488111 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
COPS7B-221ENST00000488111 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
COPS7B-221ENST00000488111 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
COPS7B-221ENST00000488111 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
COPS7B-221ENST00000488111 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
COPS7B-221ENST00000488111 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
COPS7B-221ENST00000488111 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
COPS7B-221ENST00000488111 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
COPS7B-221ENST00000488111 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
COPS7B-221ENST00000488111 PARP10Q53GL7 1025 aa16.63■□□□□ 0.25
COPS7B-221ENST00000488111 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
COPS7B-221ENST00000488111 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
COPS7B-221ENST00000488111 ADRA2BP18089 450 aa16.62■□□□□ 0.25
COPS7B-221ENST00000488111 SSFA2P28290 1259 aa16.62■□□□□ 0.25
COPS7B-221ENST00000488111 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
COPS7B-221ENST00000488111 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
COPS7B-221ENST00000488111 SIL1Q9H173 461 aa16.62■□□□□ 0.25
COPS7B-221ENST00000488111 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
COPS7B-221ENST00000488111 NTSR2O95665 410 aa16.61■□□□□ 0.25
COPS7B-221ENST00000488111 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
COPS7B-221ENST00000488111 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
COPS7B-221ENST00000488111 ANKRD36CQ5JPF3 1778 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-221ENST00000488111 KIF2CQ99661 725 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 ZNF500O60304 480 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-221ENST00000488111 BAG6P46379 1132 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-221ENST00000488111 RBM10P98175 930 aaKnown RBP16.6■□□□□ 0.25
COPS7B-221ENST00000488111 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 IL1RAPL2Q9NP60 686 aa16.6■□□□□ 0.25
COPS7B-221ENST00000488111 GYS1P13807 737 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-221ENST00000488111 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 ZNF445P59923 1031 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 PTPN12Q05209 780 aaKnown RBP16.59■□□□□ 0.25
COPS7B-221ENST00000488111 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-221ENST00000488111 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
COPS7B-221ENST00000488111 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
COPS7B-221ENST00000488111 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.25
COPS7B-221ENST00000488111 PDE8AO60658 829 aa16.58■□□□□ 0.25
COPS7B-221ENST00000488111 HMGB2P26583 209 aaKnown RBP16.58■□□□□ 0.25
COPS7B-221ENST00000488111 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.25
COPS7B-221ENST00000488111 NFIXQ14938 502 aa16.58■□□□□ 0.25
COPS7B-221ENST00000488111 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.25
COPS7B-221ENST00000488111 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
COPS7B-221ENST00000488111 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.24
COPS7B-221ENST00000488111 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
COPS7B-221ENST00000488111 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 C4AP0C0L4 1744 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 RGL2O15211 777 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 CSF1RP07333 972 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 CTSWP56202 376 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
COPS7B-221ENST00000488111 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-221ENST00000488111 GREM2Q9H772 168 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 PDLIM2Q96JY6 352 aa16.57■□□□□ 0.24
COPS7B-221ENST00000488111 R3HCC1Q9Y3T6 440 aaKnown RBP16.57■□□□□ 0.24
COPS7B-221ENST00000488111 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
COPS7B-221ENST00000488111 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
COPS7B-221ENST00000488111 CCDC57Q2TAC2 916 aa16.56■□□□□ 0.24
COPS7B-221ENST00000488111 COPRSQ9NQ92 184 aa16.56■□□□□ 0.24
COPS7B-221ENST00000488111 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
COPS7B-221ENST00000488111 PNPLA7Q6ZV29 1317 aa16.56■□□□□ 0.24
COPS7B-221ENST00000488111 SLC15A2Q16348 729 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms