RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585		H7C1D1	291 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	CELF2	O95319	508 aa	Known RBP	12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	GMPS	P49915	693 aa	Predicted RBP	12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	RIPK4	P57078	832 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	PDIA6	Q15084	440 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	C3orf67	Q6ZVT6	689 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	CDC37L1	Q7L3B6	337 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	SAPCD2	Q86UD0	394 aa		12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	TRMT112	Q9UI30	125 aa	Known RBP	12.89	□□□□□ -0.35
PCMT1-208	ENST00000486585	SH3TC1	Q8TE82	1336 aa		12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	TCIRG1	Q13488	830 aa		12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	GRAP	Q13588	217 aa		12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	LRP10	Q7Z4F1	713 aa		12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	NLRP10	Q86W26	655 aa		12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	GRAPL	Q8TC17	118 aa	Predicted RBP	12.88	□□□□□ -0.35
PCMT1-208	ENST00000486585	CASP8AP2	Q9UKL3	1982 aa		12.87	□□□□□ -0.35
PCMT1-208	ENST00000486585	CCDC85C	A6NKD9	419 aa		12.87	□□□□□ -0.35
PCMT1-208	ENST00000486585	BRPF1	P55201	1214 aa	Predicted RBP	12.87	□□□□□ -0.35
PCMT1-208	ENST00000486585	FMR1	Q06787	632 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
PCMT1-208	ENST00000486585	COPS6	Q7L5N1	327 aa		12.87	□□□□□ -0.35
PCMT1-208	ENST00000486585	RAD17	O75943	681 aa		12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	HCLS1	P14317	486 aa	Predicted RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	MLLT1	Q03111	559 aa	Predicted RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	AIMP1	Q12904	312 aa	Known RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	NOG	Q13253	232 aa		12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	XAGE3	Q8WTP9	111 aa		12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	DPF2	Q92785	391 aa		12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	CNOT7	Q9UIV1	285 aa	Known RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	POLR2A	P24928	1970 aa	Known RBP	12.86	□□□□□ -0.35
PCMT1-208	ENST00000486585	TAF1	P21675	1872 aa		12.85	□□□□□ -0.35
PCMT1-208	ENST00000486585	AOC2	O75106	756 aa		12.85	□□□□□ -0.35
PCMT1-208	ENST00000486585	PROSER3	Q2NL68	480 aa		12.85	□□□□□ -0.35
PCMT1-208	ENST00000486585	FAM161A	Q3B820	660 aa		12.85	□□□□□ -0.35
PCMT1-208	ENST00000486585	ZNF408	Q9H9D4	720 aa		12.85	□□□□□ -0.35
PCMT1-208	ENST00000486585	HSP90B1	P14625	803 aa	Known RBP	12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	RPS12	P25398	132 aa	Known RBP	12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	TMPO	P42166	694 aa	Known RBP	12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	RGS19	P49795	217 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	RALBP1	Q15311	655 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	WASHC4	Q2M389	1173 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	PLBD2	Q8NHP8	589 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	EYA3	Q99504	573 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	LRRC37A	A6NMS7	1700 aa		12.84	□□□□□ -0.35
PCMT1-208	ENST00000486585	DDX60	Q8IY21	1712 aa	Known RBP	12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	ANXA1	P04083	346 aa		12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	HOXB7	P09629	217 aa		12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	MICALL2	Q8IY33	904 aa		12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	NECTIN2	Q92692	538 aa		12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	DBF4	Q9UBU7	674 aa	Predicted RBP	12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	AKAP11	Q9UKA4	1901 aa		12.83	□□□□□ -0.36
PCMT1-208	ENST00000486585	CHL1	O00533	1208 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	HIRA	P54198	1017 aa	Predicted RBP	12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	HUNK	P57058	714 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	SF3B3	Q15393	1217 aa	Known RBP	12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	ANKRD13D	Q6ZTN6	518 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	SLC51A	Q86UW1	340 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	C2orf69	Q8N8R5	385 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	TRPM4	Q8TD43	1214 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	CCDC102A	Q96A19	550 aa		12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	DCPS	Q96C86	337 aa	Known RBP	12.82	□□□□□ -0.36
PCMT1-208	ENST00000486585	YDJC	A8MPS7	323 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	C6orf229	H3BNL8	230 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	HDGFL1	Q5TGJ6	251 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	KRT26	Q7Z3Y9	468 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	USP48	Q86UV5	1035 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	HYPK	Q9NX55	129 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585	TSKS	Q9UJT2	592 aa		12.81	□□□□□ -0.36
PCMT1-208	ENST00000486585		G3V3G9	751 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	PSMD14	O00487	310 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	TRIM28	Q13263	835 aa	Known RBP	12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	DCAF8	Q5TAQ9	597 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	CFAP44	Q96MT7	982 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	MCOLN1	Q9GZU1	580 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	GBA2	Q9HCG7	927 aa	Predicted RBP	12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	SAGE1	Q9NXZ1	904 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	CHPF2	Q9P2E5	772 aa		12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	LAS1L	Q9Y4W2	734 aa	Known RBP	12.8	□□□□□ -0.36
PCMT1-208	ENST00000486585	PDE4DIP	Q5VU43	2346 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	DUOX1	Q9NRD9	1551 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	SLC34A2	O95436	690 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	RPS8	P62241	208 aa	Known RBP	12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	DGKZ	Q13574	1117 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	RGMB	Q6NW40	437 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	REM2	Q8IYK8	340 aa	Predicted RBP	12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	FAM89A	Q96GI7	184 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	ISCA1	Q9BUE6	129 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	CHMP4A	Q9BY43	222 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	DBNDD1	Q9H9R9	158 aa		12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.79	□□□□□ -0.36
PCMT1-208	ENST00000486585	RIMBP2	O15034	1052 aa		12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	ECE2	O60344	883 aa		12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	WDR43	Q15061	677 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	NEUROD2	Q15784	382 aa		12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	SAMD7	Q7Z3H4	446 aa		12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	SULF1	Q8IWU6	871 aa		12.78	□□□□□ -0.36
PCMT1-208	ENST00000486585	RUNDC1	Q96C34	613 aa		12.78	□□□□□ -0.36

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