RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 GRIK5Q16478 980 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 BTLAQ7Z6A9 289 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 TRIM50Q86XT4 487 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 DMRTC2Q8IXT2 367 aaPredicted RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 ALDH16A1Q8IZ83 802 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 FMR1NBQ8N0W7 255 aaPredicted RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 TSEN2Q8NCE0 465 aaKnown RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 DNAJB12Q9NXW2 375 aaKnown RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 DMGDHQ9UI17 866 aaKnown RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 MAFBQ9Y5Q3 323 aaPredicted RBP5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 CCDC88BA6NC98 1476 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 RASA1P20936 1047 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 ATP1A2P50993 1020 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 TBC1D8BQ0IIM8 1120 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 C2orf49Q9BVC5 232 aaPredicted RBP5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 PPP1R12CQ9BZL4 782 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 UBE2OQ9C0C9 1292 aaKnown RBP5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 JPH1Q9HDC5 661 aaPredicted RBP5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 BCS1LQ9Y276 419 aa5.78□□□□□ -1.48
PRPF38B-205ENST00000485810 ZBTB42B2RXF5 422 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 LMOD1P29536 600 aaPredicted RBP5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 CDCA8Q53HL2 280 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 PSAPL1Q6NUJ1 521 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 DHX37Q8IY37 1157 aaKnown RBP5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 SIX5Q8N196 739 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 STAG2Q8N3U4 1231 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 LARGE2Q8N3Y3 721 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 TP53INP1Q96A56 240 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 IGFLR1Q9H665 355 aa5.77□□□□□ -1.49
PRPF38B-205ENST00000485810 ATAD2Q6PL18 1390 aa5.76□□□□□ -1.49
PRPF38B-205ENST00000485810 PPP1R12BO60237 982 aaPredicted RBP5.76□□□□□ -1.49
PRPF38B-205ENST00000485810 CRTC2Q53ET0 693 aaPredicted RBP5.76□□□□□ -1.49
PRPF38B-205ENST00000485810 KANK4Q5T7N3 995 aaPredicted RBP5.76□□□□□ -1.49
PRPF38B-205ENST00000485810 RFX1P22670 979 aa5.75□□□□□ -1.49
PRPF38B-205ENST00000485810 RAC1P63000 192 aa5.75□□□□□ -1.49
PRPF38B-205ENST00000485810 TNIKQ9UKE5 1360 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 NFKB1P19838 968 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 NOS3P29474 1203 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 DPYDQ12882 1025 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 CHMP7Q8WUX9 453 aaPredicted RBP5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 WFDC12Q8WWY7 111 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 ZFATQ9P243 1243 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 UNC13AQ9UPW8 1703 aa5.74□□□□□ -1.49
PRPF38B-205ENST00000485810 RGS9O75916 674 aaPredicted RBP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 IREB2P48200 963 aaKnown RBP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 PTK7Q13308 1070 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 CCINQ13939 588 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 IER5Q5VY09 327 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 LARP1Q6PKG0 1096 aaKnown RBP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 FBXO11Q86XK2 927 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 SCG3Q8WXD2 468 aaKnown RBP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 NGLY1Q96IV0 654 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 MEGF10Q96KG7 1140 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 HINFPQ9BQA5 517 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 EFCC1Q9HA90 598 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 GOLGA2P5Q9HBQ8 144 aa5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 BCCIPQ9P287 314 aaKnown RBP eCLIP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 RBM19Q9Y4C8 960 aaKnown RBP5.73□□□□□ -1.49
PRPF38B-205ENST00000485810 DEAF1O75398 565 aaPredicted RBP5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 SEC13P55735 322 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 PERM1Q5SV97 790 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 CFAP70Q5T0N1 1121 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 MSL1Q68DK7 614 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 VRTNQ9H8Y1 702 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 USP21Q9UK80 565 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
PRPF38B-205ENST00000485810 MAP3K6O95382 1288 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 CPB1P15086 417 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 INPP5BP32019 993 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 FAM35AQ86V20 835 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 IFT43Q96FT9 208 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 RNF112Q9ULX5 631 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 CHMP3Q9Y3E7 222 aa5.71□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L15C9J2P7 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L10C9JJH3 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L13C9JLJ4 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L12C9JPN9 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L11C9JVI0 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L21D6R901 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L18D6R9N7 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L22D6RA61 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L17D6RBQ6 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L19D6RCP7 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L20D6RJB6 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 TGFBR3LH3BV60 316 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 RBM25P49756 843 aaKnown RBP5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 USP17L24Q0WX57 530 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 RTN1Q16799 776 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 ZNF326Q5BKZ1 582 aaKnown RBP5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 ANKMY2Q8IV38 441 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 DTWD1Q8N5C7 304 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 CEP162Q5TB80 1403 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 ABCC8Q09428 1581 aa5.7□□□□□ -1.5
PRPF38B-205ENST00000485810 TARSP26639 723 aaKnown RBP5.69□□□□□ -1.5
PRPF38B-205ENST00000485810 MLLT1Q03111 559 aaPredicted RBP5.69□□□□□ -1.5
PRPF38B-205ENST00000485810 TRPM4Q8TD43 1214 aa5.69□□□□□ -1.5
PRPF38B-205ENST00000485810 TTC9Q92623 222 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms