RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ANO2Q9NQ90 1003 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
CTSA-207ENST00000484855 ZNF609O15014 1411 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
CTSA-207ENST00000484855 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
CTSA-207ENST00000484855 BRWD3Q6RI45 1802 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 FBXO3Q9UK99 471 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 PDE8AO60658 829 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 RABEP1Q15276 862 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 TTLL11Q8NHH1 800 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 DBNDD2Q9BQY9 259 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
CTSA-207ENST00000484855 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 ZNF652Q9Y2D9 606 aa20.31■□□□□ 0.84
CTSA-207ENST00000484855 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
CTSA-207ENST00000484855 ATP5JP18859 108 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 MCCP23508 829 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 IL25Q9H293 177 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 GREM2Q9H772 168 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
CTSA-207ENST00000484855 SH3TC1Q8TE82 1336 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 SGSM2O43147 1006 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 ITGA6P23229 1130 aa20.29■□□□□ 0.84
CTSA-207ENST00000484855 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
CTSA-207ENST00000484855 NIP7Q9Y221 180 aaKnown RBP eCLIP20.29■□□□□ 0.84
CTSA-207ENST00000484855 CWC27Q6UX04 472 aaKnown RBP20.28■□□□□ 0.84
CTSA-207ENST00000484855 AK7Q96M32 723 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 ANKRD18BA2A2Z9 1011 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
CTSA-207ENST00000484855 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 NEUROD6Q96NK8 337 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
CTSA-207ENST00000484855 EPB41L2O43491 1005 aaKnown RBP20.27■□□□□ 0.84
CTSA-207ENST00000484855 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
CTSA-207ENST00000484855 CASZ1Q86V15 1759 aa20.27■□□□□ 0.83
CTSA-207ENST00000484855 LRP5O75197 1615 aa20.27■□□□□ 0.83
CTSA-207ENST00000484855 HIP1O00291 1037 aa20.27■□□□□ 0.83
CTSA-207ENST00000484855 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.83
CTSA-207ENST00000484855 FSD1Q9BTV5 496 aa20.27■□□□□ 0.83
CTSA-207ENST00000484855 C4BP0C0L5 1744 aa20.26■□□□□ 0.83
CTSA-207ENST00000484855 RIC1Q4ADV7 1423 aa20.26■□□□□ 0.83
CTSA-207ENST00000484855 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
CTSA-207ENST00000484855 A0A1B0GUL7 405 aa20.25■□□□□ 0.83
CTSA-207ENST00000484855 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
CTSA-207ENST00000484855 TIMM10P62072 90 aa20.25■□□□□ 0.83
CTSA-207ENST00000484855 NTSR2O95665 410 aa20.25■□□□□ 0.83
CTSA-207ENST00000484855 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
CTSA-207ENST00000484855 RAD50Q92878 1312 aa20.25■□□□□ 0.83
CTSA-207ENST00000484855 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
CTSA-207ENST00000484855 AKAP2Q9Y2D5 859 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 GNPATO15228 680 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 RPS6KA4O75676 772 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 NBR1Q14596 966 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 HAUS7Q99871 368 aa20.24■□□□□ 0.83
CTSA-207ENST00000484855 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
CTSA-207ENST00000484855 K7ELQ4 463 aaPredicted RBP20.23■□□□□ 0.83
CTSA-207ENST00000484855 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
CTSA-207ENST00000484855 ANAPC15P60006 121 aa20.23■□□□□ 0.83
CTSA-207ENST00000484855 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
CTSA-207ENST00000484855 BCL11BQ9C0K0 894 aaPredicted RBP20.23■□□□□ 0.83
CTSA-207ENST00000484855 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
CTSA-207ENST00000484855 RGL2O15211 777 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 EDC3Q96F86 508 aaKnown RBP20.22■□□□□ 0.83
CTSA-207ENST00000484855 CNNM1Q9NRU3 951 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 RFX7Q2KHR2 1363 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 NMIQ13287 307 aaPredicted RBP20.22■□□□□ 0.83
CTSA-207ENST00000484855 METTL24Q5JXM2 366 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 RIPOR2Q9Y4F9 1068 aa20.22■□□□□ 0.83
CTSA-207ENST00000484855 ST18O60284 1047 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 PALD1Q9ULE6 856 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 RTCBQ9Y3I0 505 aaKnown RBP20.21■□□□□ 0.83
CTSA-207ENST00000484855 NDUFB9Q9Y6M9 179 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 HSPA4P34932 840 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
CTSA-207ENST00000484855 KRT27Q7Z3Y8 459 aa20.2■□□□□ 0.82
CTSA-207ENST00000484855 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
CTSA-207ENST00000484855 ARAP2Q8WZ64 1704 aa20.2■□□□□ 0.82
CTSA-207ENST00000484855 CCDC152Q4G0S7 254 aa20.19■□□□□ 0.82
CTSA-207ENST00000484855 USPL1Q5W0Q7 1092 aa20.19■□□□□ 0.82
CTSA-207ENST00000484855 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
CTSA-207ENST00000484855 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
CTSA-207ENST00000484855 A0A0D9SFI3 127 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 ZPR1O75312 459 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
CTSA-207ENST00000484855 ATP2B3Q16720 1220 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
CTSA-207ENST00000484855 RTL9Q8NET4 1388 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 ADORA1P30542 326 aa20.18■□□□□ 0.82
CTSA-207ENST00000484855 CCDC158Q5M9N0 1113 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms