RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 HSH2DQ96JZ2 352 aa12.66□□□□□ -0.38
TTC3-218ENST00000484047 ELP3Q9H9T3 547 aa12.66□□□□□ -0.38
TTC3-218ENST00000484047 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.38
TTC3-218ENST00000484047 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
TTC3-218ENST00000484047 GRM2Q14416 872 aa12.65□□□□□ -0.38
TTC3-218ENST00000484047 RSRP1Q9BUV0 290 aa12.65□□□□□ -0.38
TTC3-218ENST00000484047 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.38
TTC3-218ENST00000484047 PLA2G4AP47712 749 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
TTC3-218ENST00000484047 CHRDQ9H2X0 955 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 POTECB2RU33 542 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 KLF4O43474 513 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 FILIP1Q7Z7B0 1213 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 TTF2Q9UNY4 1162 aaKnown RBP12.64□□□□□ -0.39
TTC3-218ENST00000484047 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
TTC3-218ENST00000484047 COL4A3BPQ9Y5P4 624 aa12.64□□□□□ -0.39
TTC3-218ENST00000484047 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
TTC3-218ENST00000484047 ANAPC15P60006 121 aa12.63□□□□□ -0.39
TTC3-218ENST00000484047 Q6ZVU0 165 aa12.63□□□□□ -0.39
TTC3-218ENST00000484047 CMTR1Q8N1G2 835 aaKnown RBP12.63□□□□□ -0.39
TTC3-218ENST00000484047 BRINP2Q9C0B6 783 aa12.63□□□□□ -0.39
TTC3-218ENST00000484047 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
TTC3-218ENST00000484047 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 EREGO14944 169 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 INPP5BP32019 993 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 GALNT12Q8IXK2 581 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 C3orf58Q8NDZ4 430 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 ZNF395Q9H8N7 513 aaPredicted RBP12.62□□□□□ -0.39
TTC3-218ENST00000484047 SNTG2Q9NY99 539 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 IER5Q5VY09 327 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 HNRNPLLQ8WVV9 542 aaKnown RBP12.62□□□□□ -0.39
TTC3-218ENST00000484047 MRGPRX2Q96LB1 330 aa12.62□□□□□ -0.39
TTC3-218ENST00000484047 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
TTC3-218ENST00000484047 FAM221BA6H8Z2 402 aa12.61□□□□□ -0.39
TTC3-218ENST00000484047 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
TTC3-218ENST00000484047 RELBQ01201 579 aa12.61□□□□□ -0.39
TTC3-218ENST00000484047 RAB33AQ14088 237 aa12.61□□□□□ -0.39
TTC3-218ENST00000484047 GLIS3Q8NEA6 775 aa12.61□□□□□ -0.39
TTC3-218ENST00000484047 GSTT1P30711 240 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 RASA3Q14644 834 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 C4orf17Q53FE4 359 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 C1orf127Q8N9H9 656 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 ZCRB1Q8TBF4 217 aaKnown RBP12.6□□□□□ -0.39
TTC3-218ENST00000484047 AIDAQ96BJ3 306 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 TRIM55Q9BYV6 548 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 METTL14Q9HCE5 456 aaKnown RBP12.6□□□□□ -0.39
TTC3-218ENST00000484047 PCDH12Q9NPG4 1184 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
TTC3-218ENST00000484047 ARSDP51689 593 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 HIF1AQ16665 826 aa12.6□□□□□ -0.39
TTC3-218ENST00000484047 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
TTC3-218ENST00000484047 NNTQ13423 1086 aa12.59□□□□□ -0.39
TTC3-218ENST00000484047 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
TTC3-218ENST00000484047 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
TTC3-218ENST00000484047 ZNF296Q8WUU4 475 aaPredicted RBP12.59□□□□□ -0.39
TTC3-218ENST00000484047 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
TTC3-218ENST00000484047 TMEM74Q96NL1 305 aa12.59□□□□□ -0.39
TTC3-218ENST00000484047 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
TTC3-218ENST00000484047 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.39
TTC3-218ENST00000484047 SOX9P48436 509 aa12.58□□□□□ -0.39
TTC3-218ENST00000484047 RELL1Q8IUW5 271 aa12.58□□□□□ -0.39
TTC3-218ENST00000484047 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.39
TTC3-218ENST00000484047 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.39
TTC3-218ENST00000484047 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.39
TTC3-218ENST00000484047 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.4
TTC3-218ENST00000484047 LIAT1Q6ZQX7 453 aa12.57□□□□□ -0.4
TTC3-218ENST00000484047 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
TTC3-218ENST00000484047 PWP1Q13610 501 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 PLEKHG4Q58EX7 1191 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 BTLAQ7Z6A9 289 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 RPUSD2Q8IZ73 545 aaKnown RBP12.56□□□□□ -0.4
TTC3-218ENST00000484047 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
TTC3-218ENST00000484047 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
TTC3-218ENST00000484047 CCDC85CA6NKD9 419 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 PARNO95453 639 aaKnown RBP12.56□□□□□ -0.4
TTC3-218ENST00000484047 NBPF1Q3BBV0 1214 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
TTC3-218ENST00000484047 WNT7AO00755 349 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
TTC3-218ENST00000484047 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
TTC3-218ENST00000484047 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 STRIP2Q9ULQ0 834 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
TTC3-218ENST00000484047 FBXO24O75426 580 aa12.54□□□□□ -0.4
TTC3-218ENST00000484047 GGCXP38435 758 aa12.54□□□□□ -0.4
TTC3-218ENST00000484047 KLF16Q9BXK1 252 aaPredicted RBP12.54□□□□□ -0.4
TTC3-218ENST00000484047 DNAJC6O75061 913 aa12.54□□□□□ -0.4
TTC3-218ENST00000484047 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms