RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 CCDC152Q4G0S7 254 aa14.34□□□□□ -0.11
SORT1-204ENST00000482236 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
SORT1-204ENST00000482236 CCDC85AQ96PX6 553 aaPredicted RBP14.34□□□□□ -0.11
SORT1-204ENST00000482236 METTL22Q9BUU2 404 aaPredicted RBP14.34□□□□□ -0.11
SORT1-204ENST00000482236 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
SORT1-204ENST00000482236 PI4KAP2A4QPH2 592 aa14.33□□□□□ -0.12
SORT1-204ENST00000482236 C6orf229H3BNL8 230 aa14.33□□□□□ -0.12
SORT1-204ENST00000482236 EXOSC9Q06265 439 aaKnown RBP14.33□□□□□ -0.12
SORT1-204ENST00000482236 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
SORT1-204ENST00000482236 PI4KAP1Q8N8J0 262 aa14.33□□□□□ -0.12
SORT1-204ENST00000482236 FLIIQ13045 1269 aa14.32□□□□□ -0.12
SORT1-204ENST00000482236 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
SORT1-204ENST00000482236 SP8Q8IXZ3 490 aa14.32□□□□□ -0.12
SORT1-204ENST00000482236 GPC2Q8N158 579 aa14.32□□□□□ -0.12
SORT1-204ENST00000482236 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
SORT1-204ENST00000482236 ANKIB1Q9P2G1 1089 aa14.32□□□□□ -0.12
SORT1-204ENST00000482236 NSFL1CQ9UNZ2 370 aaKnown RBP14.32□□□□□ -0.12
SORT1-204ENST00000482236 PCCAP05165 728 aaPredicted RBP14.31□□□□□ -0.12
SORT1-204ENST00000482236 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
SORT1-204ENST00000482236 CHADLQ6NUI6 762 aa14.31□□□□□ -0.12
SORT1-204ENST00000482236 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
SORT1-204ENST00000482236 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
SORT1-204ENST00000482236 PDE8AO60658 829 aa14.3□□□□□ -0.12
SORT1-204ENST00000482236 EPHX2P34913 555 aa14.3□□□□□ -0.12
SORT1-204ENST00000482236 ANKRD18AQ8IVF6 992 aa14.3□□□□□ -0.12
SORT1-204ENST00000482236 EYA3Q99504 573 aa14.3□□□□□ -0.12
SORT1-204ENST00000482236 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
SORT1-204ENST00000482236 FZD9O00144 591 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 CWF19L2Q2TBE0 894 aaKnown RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 SLC51AQ86UW1 340 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 PNMA8AQ86V59 439 aaPredicted RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 CELF1Q92879 486 aaKnown RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 CDC5LQ99459 802 aaKnown RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 TAF1DQ9H5J8 278 aaPredicted RBP14.29□□□□□ -0.12
SORT1-204ENST00000482236 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
SORT1-204ENST00000482236 UFL1O94874 794 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 CTSWP56202 376 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
SORT1-204ENST00000482236 HTRA3P83110 453 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 TNIP1Q15025 636 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 G2E3Q7L622 706 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 ZNRF3Q9ULT6 936 aa14.28□□□□□ -0.12
SORT1-204ENST00000482236 LAMB2P55268 1798 aa14.27□□□□□ -0.12
SORT1-204ENST00000482236 RAD17O75943 681 aa14.27□□□□□ -0.13
SORT1-204ENST00000482236 CIAPIN1Q6FI81 312 aa14.27□□□□□ -0.13
SORT1-204ENST00000482236 SLC4A10Q6U841 1118 aa14.27□□□□□ -0.13
SORT1-204ENST00000482236 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
SORT1-204ENST00000482236 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
SORT1-204ENST00000482236 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
SORT1-204ENST00000482236 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
SORT1-204ENST00000482236 ZC3H12CQ9C0D7 883 aaKnown RBP14.26□□□□□ -0.13
SORT1-204ENST00000482236 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
SORT1-204ENST00000482236 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
SORT1-204ENST00000482236 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
SORT1-204ENST00000482236 POTECB2RU33 542 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 E9PSI1 815 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 VAMP4O75379 141 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 POTEJP0CG39 1038 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 KCNJ4P48050 445 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 GPSM2P81274 684 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
SORT1-204ENST00000482236 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
SORT1-204ENST00000482236 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 GMPSP49915 693 aaPredicted RBP14.24□□□□□ -0.13
SORT1-204ENST00000482236 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
SORT1-204ENST00000482236 LINS1Q8NG48 757 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 C9orf78Q9NZ63 289 aaPredicted RBP14.24□□□□□ -0.13
SORT1-204ENST00000482236 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
SORT1-204ENST00000482236 SCN4AP35499 1836 aa14.23□□□□□ -0.13
SORT1-204ENST00000482236 F6X3S4 739 aa14.23□□□□□ -0.13
SORT1-204ENST00000482236 ECE2O60344 883 aa14.23□□□□□ -0.13
SORT1-204ENST00000482236 GCKRQ14397 625 aa14.23□□□□□ -0.13
SORT1-204ENST00000482236 MAP1SQ66K74 1059 aaPredicted RBP14.23□□□□□ -0.13
SORT1-204ENST00000482236 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
SORT1-204ENST00000482236 XDHP47989 1333 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 H7C1D1 291 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 EPS15P42566 896 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 CXCL9Q07325 125 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 KLRG1Q96E93 195 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 GPR101Q96P66 508 aaPredicted RBP14.22□□□□□ -0.13
SORT1-204ENST00000482236 GREM2Q9H772 168 aa14.22□□□□□ -0.13
SORT1-204ENST00000482236 ADARB2Q9NS39 739 aaKnown RBP14.22□□□□□ -0.13
SORT1-204ENST00000482236 ABT1Q9ULW3 272 aaKnown RBP14.22□□□□□ -0.13
SORT1-204ENST00000482236 COL4A5P29400 1685 aa14.21□□□□□ -0.13
SORT1-204ENST00000482236 CCER2I3L3R5 266 aa14.21□□□□□ -0.13
SORT1-204ENST00000482236 ATP2B4P23634 1241 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms